KEGG   Paralichthys olivaceus (Japanese flounder): 109643220
Entry
109643220         CDS       T06037                                 
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    109643220 (rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pov03019]
    109643220 (rae1)
   03036 Chromosome and associated proteins [BR:pov03036]
    109643220 (rae1)
Messenger RNA biogenesis [BR:pov03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     109643220 (rae1)
Chromosome and associated proteins [BR:pov03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109643220 (rae1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin WD40_RFWD3 Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_SPT8 NBCH_WD40 ExoI_SH3 Beta-prop_WDR41
Other DBs
NCBI-GeneID: 109643220
NCBI-ProteinID: XP_019963820
LinkDB
Position
Unknown
AA seq 372 aa
MSLFGTSSGFGTGGTGVFGSTTTDSHNPMKTVQQDVEVTSPPDDSISCLAFSPPTMPGNF
LIGGSWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLN
SNQAMQIAQHDGPIKAIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCA
DVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSI
EGRVAIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGR
FSFWDKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLR
NAAEELKPRNKK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgagtttatttgggacgagctccgggtttggaacaggagggactggtgtctttgggagc
acaacaacagacagccataatcccatgaagactgtccaacaggatgttgaagtgacttcc
cctccagatgacagtatcagctgtctggcttttagtccgcccaccatgccagggaacttc
ctcattggaggatcctgggccaatgatgtcaggtgctgggaggtgcaagacaatggccag
acagttcccaaagcccaacagatgcacacaggcccagtgctggacgcatgctggagtgat
gatggtagtaaagtgttcactgcttcctgtgacaagacagccaagatgtgggatctcaac
agcaatcaagccatgcagatagcacagcatgatggtccaatcaaagcaatccactggata
aaagcccctaactacagctgtatcatgactggcagctgggacaaaacactgaagttctgg
gacacccgttcccccaatcccatgatgtctttgcagatgccagagagatgctactgtgca
gatgttgtttaccccatggcagtggttgctacagctgagagaggactgatagtgtaccag
ctggagaaccagccctcggaatttcgcagaatagaatctcctcttaaacaccagcaccgc
tgtgttgccatattcaaggacaagcagaacaagcccacaggctttgctctgggaagcatt
gagggtcgagtagccatccactacatcaaccctccaaacccagccaaagacaacttcacc
ttcaagtgccacaggtccaatggaaccaacacaaccacaccgcaggacatctacgctgtc
aatgctatctccttccatcctgttcatggcacactggctactgtaggctcagacggccgc
ttcagcttctgggacaaagacgcccgcaccaagttgaagacgtctgagcagcttgaccag
cccattacagcttgctgctttaaccataatggcaacatctttgcatatgcttccagttac
gactggtcgaagggccatgagtattacaacccccagaaaaagaactacatctttctgagg
aatgctgcagaggaactgaagcctcggaacaagaaatga

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