Paralichthys olivaceus (Japanese flounder): 109644001
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Entry
109644001 CDS
T06037
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04510
Focal adhesion
pov04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109644001
09142 Cell motility
04810 Regulation of actin cytoskeleton
109644001
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_1
SH3_2
CH
SH2
SH3_9
SOS1_NGEF_PH
C1_1
PH
RHG20_PH
CDC24
Filamin
SRA1
DUF7145
PA28_C
Motif
Other DBs
NCBI-GeneID:
109644001
NCBI-ProteinID:
XP_019964840
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MEHWRQCTVWLIGCNVLPMNHRVTTDTAQVFDLAQTLRDGVLLCQLLNNLRPHTINLKEI
NLRPQMSQFLCLKNIRTFLMSCYDVFGMKKCDLFEPFDLFDVRDFGKVMDTLSQLSYTTV
AQQAGFKPFPMEETLKDEDIYSNLEDLIDENVLEDEDDLYAVVYGLEEDCTGGEIYEDLM
RTEQPPPLKQAGVDVRICCLTEIKQTEEKYTETLESIEKYFLNPLTKFFSAAEIDRIFLN
IPDLVKVHKSLMVDVQDSILNKNALNLYQIFLSYKERLLIYGIYCSRVEIAIAVLDLISK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKSNLKIA
LDAMKDLAQYVNEVKRDNETLREIDQYQRSIENMSQSLITFGRPKGDGEVRMISSVDKRK
QDRHIFLFDVAVIVCKRRGDNYEMKDVLDLNYFKITNNPMSDKEGKKWCYGFYVTHQQGY
NGFELFFKTRELKKKWLDQFEMAISNIRPEKANHNSHQFKMHTFERITSCCFCHLLLRGI
FNQGYLCLKCGLGAHKECLGRLGVCGRTDLAKPKPKENSAAADPGLPRMVVIRDYGGIPY
PQCGPPLSIHVGDVIEVMFADLHSSWWQGKILATSKIGFFPSDAVRPCPCVPKPVDYSAQ
LCMIDCSVSAVVVHGWFRFAGPMERYQAEVELLDRGNGTYLVRNRSKECTEYAISIKFND
KIKHIKILTKDGCFYIAESRLFKTVLDLVEYYKQHSLKEGFSSLDTTLQVPYRELTNGIM
PMAVTKADSVFSHRVLGIAVARYDFCSRDTREISLLQGDIIKIYTKMTSGWWKGEVDGRI
GWFPSTYVEEED
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggagcactggaggcagtgcacggtttggcttatcggctgcaacgtgctgcccatgaac
caccgggtgaccacggacacggcgcaggtgttcgacctggcgcaaaccctgcgggacggg
gtgctgctgtgccagctgctgaacaacctgagaccccacaccatcaacctgaaagagatc
aacctcaggccgcagatgtcacagttcctgtgcttgaagaacatccgcacgttcctgatg
tcgtgctacgacgtgtttgggatgaagaaatgcgacttatttgaaccctttgatctcttt
gatgttcgagacttcggaaaggtaatggacacgctgtctcagctctcgtacacaacagtt
gcacagcaagcaggattcaagcccttcccgatggaggagaccctgaaagacgaggacatc
tacagtaatctggaagacttgattgatgagaatgtccttgaggacgaggacgacttgtac
gcggtggtctacgggctggaggaggactgcacaggtggagagatctacgaagatctcatg
aggactgagcagcctcccccactgaagcaggcgggggtcgatgtgcggatctgctgcctg
acagagatcaaacagacggaggagaaatacacggagacgttggagtccatcgagaagtat
ttcctgaatcctctcaccaagttcttctctgcggctgaaatcgacaggatttttctcaac
attcctgacctggttaaagttcacaagagcctgatggttgatgtgcaggattccatcttg
aacaaaaacgccttaaatctctaccagattttcctcagctacaaagagagactgctcatt
tatggcatctactgcagtcgggtggagatcgccatcgctgttttagacctcatcagcaaa
gagaaagaggacgttcgactgaagctggaggagtgctccaaaagggccaacaatgggaag
tttacactgagggacctgctggtggttccgatgcagagagtcctgaagtaccatctgctt
cttcaggagttagtcaaacacacccacgatgctgctgacaagagtaacctgaagatcgct
ctcgacgccatgaaagacctggctcagtatgtcaacgaggtgaagagagataatgagacg
ctcagggagatcgaccagtaccagaggtccatcgaaaacatgagtcagtctctcatcacc
tttggacggcccaaaggagacggagaggtgcgcatgatctccagtgttgacaagaggaaa
caagacagacacatctttttatttgacgtggctgtcattgtttgcaagagacgaggggac
aactacgagatgaaggacgtgctcgacctcaactacttcaagatcaccaacaaccctatg
tctgacaaagaggggaaaaagtggtgctacgggttctacgtgactcaccagcaggggtac
aacggctttgaactctttttcaagaccagagagctgaagaagaagtggctggatcagttt
gaaatggccatatcaaatatccgaccagagaaagccaaccacaactcccaccagttcaag
atgcacacgtttgaaaggatcacatcctgttgcttctgtcacctcctgctcaggggcatc
tttaaccagggctatctctgccttaaatgtggtctgggggctcataaggaatgtttgggt
cgactgggagtgtgcggaagaacagatttggccaagccgaaacccaaggaaaactcagca
gcagcagacccaggtttacccaggatggttgtgatcagagactatggtggcatcccttat
ccccagtgcgggcccccactaagcattcatgtgggggatgtcattgaagtgatgtttgca
gacctgcacagctcctggtggcagggcaaaattctggcgacgagcaagattggcttcttt
ccaagcgacgctgtgaggccctgcccgtgtgttccaaaacctgtcgattactccgcccag
ctctgtatgattgattgcagtgtaagtgcagtagttgttcacgggtggttcaggtttgca
gggcccatggagagataccaggctgaggtggagctcctggacagaggaaacggcacctat
ctggttcgaaaccggagtaaagaatgcaccgagtacgccatcagtataaagttcaacgat
aaaatcaagcacattaagattctgaccaaggacggctgcttttacatcgctgagagccgg
ctgttcaagactgtgctggacttagtggagtactacaagcagcactctctgaaggagggt
ttcagcagtctcgacaccactctacaggtcccctatagggaacttaccaatggaatcatg
cccatggccgttaccaaagctgacagtgtgttttcccacagggtgttgggtattgcagtg
gcacgctatgacttctgctccagagacacacgggagatctcactgctgcagggagacatt
atcaagatctacaccaagatgaccagtggctggtggaagggagaggtggacggcaggatc
ggctggtttccctccacatatgtggaagaagaggactga
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