Paralichthys olivaceus (Japanese flounder): 109644262
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Entry
109644262 CDS
T06037
Name
(RefSeq) low-density lipoprotein receptor-related protein 2-like
KO
K06233
low density lipoprotein-related protein 2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
109644262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109644262
Membrane trafficking [BR:
pov04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109644262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_LRP2
SGL
Motif
Other DBs
NCBI-GeneID:
109644262
NCBI-ProteinID:
XP_019965175
LinkDB
All DBs
Position
Unknown
AA seq
2596 aa
AA seq
DB search
YMFFSDWEALNGQPGLERAFMDGTNRYGIVWSKLGSPAGLTLDIEAKRIYWVDSRYDYIE
TATYDGLHRKTVVHGGAVIPHPYGISLFEHSVFFTDWTKMAVMKANKFNDSSPQVVYSTA
QFPHGVAVIHQLKQPQVPNPCSVDRGGCEQICVLSHRSDNGGLGYRCKCRMGYDLHADGK
RCLAVRQFLLFSSQLAVRGIPFNLSTQEDVILPVTGSPSYFVGVDFSAEDDAIFFSDTVK
DIIYKQKVNGTGREVLAANRVEGVEDLAYDWISKNLYWTDPRYRSISVMKLADKSRRAIV
QNLNNPRAIVVHPLLGYIFWTDWYRPAKIMRAWGDGSHAMSIVNTTLGWPNGLAIDWSSA
RLYWVDAFFDRIEHSSFDGTNRLSLDRITQISHPFGLTIFEGYAYFTDWRLGGIVRVRKT
DGGEMVVIRRGISHIMHVKSFNSNSQIGSNFCNRQTNPNGDCSHFCFPAPYSLRVCGCPY
GMKLSPNQQTCVEDSSSEPPILQCGANSFSCGNGKCVPNSYRCDGVDDCHDNSDELNCGI
NNNTCSPIAFTCANQRCVPAGWRCDGYNDCFDNSDENNCPTHIPRTCLANQFTCTNHRCI
PNTWRCDTDNDCGDGSDEADCHLGSTCYPGQFQCPDHRCIDPSFVCDGDRDCVDGADEQG
CIYNCTVNEFKCSSGHQCINSYYRCDGVFDCSDRSDEQNCPTRPPGMCHHESEFQCQSDG
SCVPSTWECDGHPDCEDGSDEHHACPPRTCPSILFRCDNGNCVLHSWICDGDNDCRDMSD
ERDCPTPPFRCPSWQWQCPGHSVCINLTIVCDNTPDCPNGADESPICNEALPDQESCSDN
NAGCTHGCIQGPFGAQCTCPVGYQLSNDSKTCQDIDECNPPGLCSQHCFNERGSFRCHCQ
DGYTLEADQRTCKASDSRQAFLLVASRNQIIQDDITTQPNVVRSLVRDGRNIVALDFDSV
EDRVYWSDTSQDRIWSAHTDGSDRTVIFDSGVTVTESLAVDWVGRNLYWTDYVLETIEVS
KLDGTHRTVLISENVTNPRGLVLDPRDSSHLMFWTDWGRNPRIERASMDGKLRTVIISKK
LYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQVLASDLVLQHPHAITIFEDFVY
WTDRYINRVMRAHKWHGENQTVMLFNLPQPMGLVAVHPARQPAGENLCLRSPCTHICLLS
AVGPRYYSCACPSGWTLAADQITCTRVEDPFLVVVRDSIIYGISLNPDDKSNDAMVPVAG
LQNGYDVDFDDSEQTIYWVEHPGEIHRVKSDGTNRTEFAPAAILGSPVGLALDWLSENLY
YTNPATQSIEVLKLRGEWQYRKTLITNNGSPTGAGIPIGIAVDPARGKLYWTDMGTESGI
SAKVASADMDGQNPVVLFTNNLDHVEFLTVDIQENKLYWGVTSTGMIERGDPDGTNRITI
VTGLSHPWGVAVYENYLYFTDRDFEVIERVDKSTGANKVVLRDNVSGLRVLKVHYRDASA
GSSNGCTNNVGVCEQLCLPRPQGLFTCACATGFKLGADNMTCTPYQSYVIISTLSAIKGF
SLEGADHSEAMVPVAGRGRNALHIDVHMASGFIYWCDFSSTVAIQNGVRRIKPDGSGLRS
IVTSGIGRNGIRGIAVDWAAGNLYFTNAFLTETYVEVLRLNTTFRRVLLKTQVDMPRHII
VDPRNRYLFWADYGQNPKIERAFLDGTNRTILVSSGILTPRGLALDGQTGYVYWVDDSLD
MIARVNNQGGETEIVRYGSRYPTPYGITVFENSIIWVDRNLKKVFQASKEPGSTEQPAVI
RDNINMLRDVSIFDQRIQPITPQELNHNPCIEANGGCAHFCFALPDYSMGNQYKKCGCAF
GNLAADNESCVVSRDDYLIYTTESTVRSLRLDPEDHSLPFPVVNVPRTSVALDFDLSDSR
VYFTQSSGAGASKISYISLSSPTSAPVVVASDLGAPDGIAFDWINRRIYYSDYVNQSISS
MSVNGSQRTVIAHVSRPRAIMLDPCRGYMYWTDWGTHAKIERATLGGNFRTEVVSSSLVW
PNGLTLDYEEERLYWADASLQKIERSSLTGSNREVIVSTAIYPFAMAMFGQFIYWTDWNT
RSIYRANKHDGSGQRVMIQSLPSRPMDIHIVASRKQQQCDSPCQQFNGGCSHICTPGPNG
AECQCPSEGRWYLADDKRCIPDNGTRCQPGQFTCNNGRCIYAQWKCDNDNDCGDGSDELE
RVCAFHTCEPTVFTCGNGRCVPYHYRCDHYDDCGDNSDEVGCLFQPCDPNTEFACNNGRC
IAKDYVCNGINNCYDNGTSDEQNCPERTCQPEHTKCQSTNICIPRSYLCDGDNDCGDMSD
ESPTHCATSTCSQSEFRCSSGRCIPAHWHCDGGADCADGSDEPLSCTTLDRTCNTDQFRC
DDGRCIASSWICDGDNDCGDMSDEDERHNCANRTCSSSEFTCVNNQPPQRKCIPRDWLCD
GDADCADALDEHQNCSRRSCGINEFTCSNGLCIRSSYRCDRRNDCGDSSDEQSCTHPPCQ
QHQFTCHNGRCVPHIFVCDGDNDCGDESDELEHMCHTPAPTCPPAEFRCDNGHCIPLSQI
CDRNDDCSDNSDEKGC
NT seq
7790 nt
NT seq
+upstream
nt +downstream
nt
gtacatgttcttctcagattgggaggcactgaatggacagccaggcttggagcgggcttt
catggacggcacaaaccgttatgggatcgtttggagtaaactgggttcgccagctggtct
tacactggacatcgaggccaagcgcatctactgggttgacagtcgctatgactacatcga
aacagcaacatatgacggcctccacagaaaaacagtggtccatggaggtgctgtaatccc
acacccatatggcatcagtctcttcgagcacagtgtctttttcacggactggaccaagat
ggctgtgatgaaagccaacaagttcaacgacagcagtcctcaggtggtttacagtaccgc
tcagtttccacatggagtagcagttatacatcagctgaaacagcctcaagtgccaaaccc
ttgcagtgtagacagaggtggttgtgagcagatctgtgttctgagtcacaggagtgacaa
tggaggactgggttacaggtgcaaatgtcgcatgggctatgacctccatgctgatggaaa
gcgttgtttggctgtgaggcagtttctgctgttctccagtcagctcgctgtgagagggat
cccctttaacctctccacccaggaagacgtcatcctgcccgtcactggatcaccttccta
ctttgttggggtggattttagtgctgaagacgatgccatcttcttctcagatacagtcaa
agatatcatctacaaacagaaagtgaatgggacaggcagggaggtactggcagccaatag
agtggaaggtgtggaggacctggcttatgactggatttcaaaaaacctctactggactga
cccgcgataccggagcatatctgtcatgaagctggctgataagtcgaggagagccatcgt
acagaacctcaacaaccccagggccatcgtggtgcatcctcttcttgggtatattttctg
gactgactggtaccggccagcgaagattatgagggcatggggtgacgggtcacatgccat
gtctattgtaaacaccactcttggctggccaaatggcctagctatcgactggagctcagc
gcgtctgtactgggtggatgccttctttgacaggatagagcacagcagttttgatggaac
aaacagactgtcattggatcgcattacccagatctcccatccatttggtctcaccatttt
tgaaggctatgcatatttcaccgactggcgcctgggtggcattgtacgtgtgcgcaagac
cgatggtggggagatggtcgttatcagaagaggaatcagccacattatgcatgtcaaatc
tttcaactccaactctcagattggttccaacttctgcaacaggcagacaaatcctaatgg
agactgcagccacttctgcttcccagccccatactctctgcgggtgtgtggttgcccata
tggcatgaagctgtcgcccaatcaacagacatgtgttgaggactcttctagcgagcctcc
aatactgcagtgtggagccaactctttctcctgtggcaacggcaaatgtgtcccaaacag
ctacagatgcgatggtgttgatgactgccatgacaacagtgacgaactcaactgcggaat
caacaacaacacttgctcccccattgcattcacatgtgccaatcagcgctgtgtgcctgc
tgggtggcgctgtgatgggtacaatgactgttttgataacagtgatgagaacaactgccc
tacacacatacctagaacatgtcttgccaatcagttcacctgtaccaaccatcgctgcat
cccaaatacttggcgttgtgacactgataatgactgtggtgacggttccgatgaagctga
ctgtcatcttgggagcacttgttatcctggacagttccagtgtccagaccaccgctgcat
agatcccagctttgtctgtgatggggacagggactgtgtggatggggcagatgagcaggg
atgcatctacaactgcactgtgaatgagttcaagtgctccagtggtcaccagtgtatcaa
ctcctactaccgatgtgatggagtctttgattgcagcgatcgctcagatgagcaaaactg
tcctaccaggcctccagggatgtgccaccatgagagtgagttccagtgccagtcagacgg
gagctgtgtcccttctacctgggagtgtgatggtcatccagactgtgaggacggaagcga
tgaacaccacgcctgcccacctcgcacctgcccttccatactcttccgctgcgacaatgg
caactgcgtgctacatagttggatttgcgatggggacaatgactgcagggatatgagcga
tgaacgagactgtcccacgccgcctttcagatgtccaagctggcagtggcagtgcccggg
ccacagtgtttgcatcaacctcaccatagtgtgtgacaacactcctgactgccctaacgg
tgcagatgagtcccctatttgtaatgaggctttgccagatcaggaaagctgttctgacaa
caatgctggctgcacccacggttgtatccaagggccatttggggcccagtgcacgtgccc
tgtgggttatcaactgagcaatgactctaaaacctgtcaggatatagatgagtgtaatcc
ccctggactttgtagccagcactgctttaatgagagaggttctttccgctgccactgcca
ggacggttatactctagaagcagaccaacgaacctgcaaggcctcagattcccgtcaggc
cttccttctcgtggccagtcgaaatcagatcattcaagatgacataaccactcagcccaa
cgtcgtccgctcactggttagagatggacgcaacattgtggccctagactttgactcggt
tgaggaccgtgtttactggtctgataccagccaggacagaatctggagtgctcacacaga
tggcagtgacagaactgtgatatttgacagtggagtgactgtgacagagagccttgctgt
agactgggtgggcaggaacctttactggactgactatgtcttggagacaattgaagtttc
taagctggatggcacccatcggactgtattaattagcgaaaacgtcactaatcctcgggg
cctggtgctggacccaagggacagttctcacctgatgttctggactgactgggggaggaa
cccccgcattgaaagggccagcatggatggaaaattgaggaccgttatcataagcaagaa
actgtactggcccaatggtctaaccatagactatccaaacaacctgttatactttgctga
cgcctacttggatttcattgactactgcgattataacggcaacaacaggaagcaagttct
tgccagtgacctggtactgcaacatccccacgcaattaccatttttgaggattttgtgta
ttggaccgacagatatatcaatcgtgtgatgcgagcccataagtggcatggggagaacca
aacagtgatgctgttcaacctccctcagccaatgggtctggtggcagtacacccagccag
gcagccagcaggtgaaaatctctgtctaaggagcccctgcactcacatctgcttgctctc
tgcggtggggccgaggtattactcgtgcgcctgcccctcaggctggacactggcagcaga
ccaaatcacctgcaccagagttgaggatcccttcctggtggttgtgagagacagcatcat
ctatggaatttccttgaacccagatgacaagagcaatgacgcgatggtccctgtagctgg
gcttcagaatggctatgatgtggactttgacgacagtgaacagaccatctactgggtgga
gcacccgggtgagatccacagggtaaaatcagatggtactaacaggacagagtttgcccc
tgcagccatcctgggctcacctgtcggcctggccttggactggttatcagagaacctgta
ctacaccaacccagctacacagtctattgaggttttgaagttgagaggggagtggcagta
caggaaaactctaatcacaaataacggctctccaactggcgctggaattcctattggcat
cgccgtggatccagcacgtggcaaactgtactggacagatatggggacagagagtggaat
ttctgccaaggtggcatcagcagacatggatggtcaaaaccctgtcgtccttttcaccaa
caacttagatcacgttgagttcctcactgttgacatccaagagaacaagctgtactgggg
tgtcacaagcactggcatgattgagcgcggtgatccagacgggactaaccgtatcaccat
agtgacaggcctgtctcacccctggggtgttgcggtctatgaaaactacctctacttcac
tgatcgcgactttgaggtcatagagcgtgtggacaagtccaccggtgccaacaaagttgt
gctgcgtgacaacgtttctggcctcagagttctgaaagtgcattacagagacgcttctgc
aggctcatccaacggctgcaccaacaatgtgggcgtgtgtgagcaactgtgcttgccacg
gccacagggtctgtttacttgtgcgtgcgccacaggttttaaacttggtgctgacaacat
gacctgcaccccctaccagtcctatgtcatcatatccactctgtctgcaatcaaaggctt
cagtctggagggggcagatcactctgaggccatggtgccggtggctgggagaggccgtaa
tgctttacatattgacgtacacatggcttctggtttcatctactggtgtgacttcagcag
cactgtggcgatacagaacggggtcagacggatcaagccagatggctcaggattacgtag
catagtgacatctggaataggacgtaacggcatacgaggcattgctgtcgactgggctgc
agggaacttgtatttcaccaatgctttcctgaccgagacgtatgtggaggtgctccgcct
gaacaccactttccgcagggtgctcctgaagacccaggtggacatgccacgccatatcat
cgtggatcccagaaacagatacttgttctgggctgattatggccagaaccccaaaattga
gcgagcattcttggatgggaccaatcgcacaattttagtttcctcaggcatactcactcc
acgaggtctcgctctggatgggcaaactggctatgtctactgggtggatgactccctgga
tatgattgctcgagtaaacaatcaaggaggggagacagagattgtgaggtatggcagccg
ctatccgactccttatgggatcacagtgtttgagaacagcatcatttgggtggacagaaa
cctgaagaaggtgtttcaagcgagcaaagagcccggtagcacagagcagcctgctgtgat
tagagacaacatcaacatgctgagagacgtttccatctttgaccagcgtattcagccaat
cactcctcaggagcttaaccacaacccctgcattgaggccaatggaggctgtgcccactt
ctgcttcgccctgccggattatagcatgggcaaccaatacaagaaatgcggctgcgcttt
tgggaatcttgcagcagataacgagagctgcgtggtgtcaagggacgattatctcatcta
cacaactgagagcactgtgcgcagcctgcgccttgatcctgaagaccattccttgccctt
ccctgtggtcaacgttcctcgcacctccgtggcgctggattttgacctctcagacagcag
ggtctacttcacacagagctcaggcgcaggagcaagcaagatcagctatatcagcctgtc
ctctcccacctcagcccctgtagtggtggcgtcagatcttggtgcacctgatggcattgc
ttttgactggataaacagaagaatttactacagtgattatgttaaccagagcatcagctc
catgtctgtgaacggctctcagaggactgttattgcccatgtgtctcgaccaagagccat
catgttggatccttgtaggggatacatgtattggacagactggggaacccatgcaaagat
tgagcgtgccactttaggtggaaacttcagaacagaggttgtgagcagtagtcttgtgtg
gcctaatggactcaccctggactatgaagaagagaggctgtattgggcggatgccagctt
acagaagattgagcgttcctctctcacggggtccaatcgggaggtcatcgtcagcaccgc
catctacccctttgctatggccatgtttggccaattcatctactggactgactggaacac
acgcagcatctatcgggccaacaagcacgacggttctggtcagcgggtcatgattcagag
ccttccatctcgaccaatggacatccacattgtagccagcaggaagcagcagcagtgcga
cagcccctgccagcagtttaacggaggctgcagccatatctgtacaccaggacctaacgg
agctgagtgtcagtgtccatcagagggtcgctggtacctggccgacgacaagcgctgtat
ccctgataacgggactcggtgccagccaggacagtttacctgcaacaatggccgctgtat
ttatgcccagtggaaatgtgacaatgacaacgactgtggagatggcagcgatgagttaga
gagagtctgtgccttccacacatgtgagcccactgtgtttacctgtggcaatgggcgctg
tgtgccctaccactaccgctgtgaccactatgacgactgtggagacaacagtgacgaagt
gggctgtcttttccaaccttgtgaccccaacacggagttcgcgtgcaacaatggccgctg
catcgcaaaggactatgtctgcaatggcatcaacaactgttacgacaacggcacctctga
tgaacaaaactgcccggagagaacctgccaaccagaacacacaaaatgtcagtctactaa
catctgcatcccacgatcatacctgtgtgatggagacaacgactgtggggatatgagtga
tgagagccctacacattgtgcaacatccacatgttcccagagtgagttccgttgctccag
cggtcgctgcatccccgcccactggcactgtgatggaggggcggactgtgccgacggctc
tgatgagcctctctcctgcaccacattggacagaacctgcaacacagaccaattccgctg
tgatgatggcaggtgtattgcctcatcctggatctgtgacggggacaatgactgtggtga
catgagcgatgaagatgagagacataattgtgccaatcgcacatgttcaagttcagagtt
cacctgtgtgaacaaccaacctcctcagcggaaatgtatcccacgtgactggttgtgtga
cggagacgcagactgtgcagatgcattagatgagcatcaaaactgctcacgcagatcctg
tggcatcaatgagttcacctgtagcaatggcctctgcatacggagttcctacaggtgtga
tcgacgaaatgactgcggagacagcagcgacgaacagagctgcactcacccgccctgcca
gcagcaccagttcacctgccacaacggccgctgcgtgccccacatcttcgtctgcgatgg
ggacaatgactgcggtgacgagtctgacgagctagagcacatgtgccatacaccggcacc
gacctgccctcctgcagagttcagatgtgataatggccactgtatccccctaagccagat
atgcgacaggaatgacgactgctctgacaacagtgatgagaagggatgcg
DBGET
integrated database retrieval system
