Paralichthys olivaceus (Japanese flounder): 109644434
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Entry
109644434 CDS
T06037
Name
(RefSeq) DNA repair and recombination protein RAD54B-like isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109644434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109644434
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109644434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
109644434
NCBI-ProteinID:
XP_019965375
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MRRSAAPSQLLGNAWKKPRFMPPGASTSCPVTESKPLAPKSGLGNALEKVQRSLSVPALS
ETRCDVQPKAAPAAPALSKALARVLSATESKENDDNMEYPDTGSKDYAEDNRTAGVSGSP
QLSPGSPQTPHPPSGSDSACSQDGACYFSVMWCKASKKKHKRWEGDAVLVTRGRTVTLKD
MEGKDIGKGSGYKVSELASLSEGQTLMVGGKEVEVMGIISAEDFSKGRCFQEVQIESEEP
QTKSAPPPPRRFASKPFCPPTLAGRAEHPGSKPAQINKTRPRHDPQAPGALVMPRPSPNH
QWSNNKPGLPVVDVVLDPHLTTHLRPHQRDGLLFLYECVMGMRAVGRYGAILADEMGLGK
TLQSVALSWTLLRQGPYGGTPVAKRVLVVTPGSLVQNWGAEFNKWLGRERISVFTVDQDH
RIEQFVLSPLHSVLVISYEMLLRSQEQVQKVDFGLVICDEGHRLKNSTIKTSSALSSLSC
NRRVILTGTPVQNDLQEFYALIEFVNPGILGSLTAYRKVYEEPILRSRQPSCTEEERVLG
EDRAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCDPSPLQLELYRHLLCHRVFRACL
QGSTQTHTHLACITALKKLCNHPGLLYSTVKERLNHGSEESSIYDGLVDLFPESYSSGGL
NMTDSGKLLVLSDLLTAIRQLNPSDRVVVVSNYTQTLDLLQDFCVHMGYTFCRLDGHTPT
NKRQRLVDSFNSSYSPNFVFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWR
DGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGAEHTSFSSNELRDLFSLT
DTPSLTHDLLNCSCSMDGSVQAAVEEEVPVFDRPCQLGRQGDRGGVAVPKHLSMSELMQW
RHFSGDTHTFADPYLDNARNHITFAFQTTISHTVNTHALQL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgctcagcagcacccagccagcttttgggtaatgcatggaaaaagcctcgattt
atgcctcctggggcctctacctcatgtcctgtgactgaatccaagcccctggcccctaaa
agtggattaggcaatgcactggaaaaggtccagagaagtctatcagtaccagctctgagt
gagacaaggtgtgatgtccagcccaaagctgcaccggctgctccagccttgtccaaggct
ctggctcgcgttctcagtgcgacggaaagtaaggaaaatgatgacaacatggaatatcct
gacactggcagcaaagactatgcagaagacaacagaacagcaggggtgagtggttctcct
cagttgagtcctgggtctcctcaaaccccacaccccccttcagggtcagactctgcctgc
agtcaggatggagcgtgttacttcagtgtgatgtggtgtaaggccagtaagaagaaacat
aagcgctgggagggtgatgcagtcctggtgacgagagggcgcacagtcactcttaaagac
atggaaggaaaagacatcggtaaaggtagtggctacaaggtgtcggagttggcctctctt
tctgagggacagaccctgatggttggtgggaaggaggtggaagtgatggggatcatttct
gccgaagacttttccaagggacgctgtttccaagaggtccaaatagagagcgaggagcca
caaacaaagtcagctcctccccctcctcgtcgttttgcatccaaacctttctgccctcca
accctggcaggaagagctgagcatccaggaagtaaaccagcgcaaatcaacaagacgaga
cctcgccatgacccccaagctccaggtgcactggtgatgcctcgtccttcccctaaccac
cagtggtctaataacaagccaggacttcctgtagttgatgttgtgcttgacccacacctg
accactcacctgagacctcaccagagagatggcctgctcttcctatatgagtgtgtcatg
ggcatgagagctgtgggtcgctacggtgccatcctggctgatgagatgggtctggggaag
accctccagagcgtggcactgtcctggacgctgctgaggcaggggccgtatggtgggacg
ccagttgctaagcgtgtcctggtggtcactcctggcagccttgtgcagaactggggtgca
gagtttaacaagtggctgggccgcgagaggatcagtgttttcacagtggatcaggaccac
aggatagagcagtttgtgttgtctcctctgcacagcgttctggtgatcagctatgagatg
ctgctgcgcagccaagagcaggtacaaaaagtggattttggtcttgtcatttgcgatgag
ggtcacagattaaagaacagcacaattaaaacatcctctgctctcagtagcctcagctgt
aatcgcagggtcatactgacaggcactccagtacagaacgacctgcaggagttttatgcg
cttatagagttcgtaaacccagggattctcgggtcattgacggcttacaggaaagtgtat
gaggagccaattctgcgctccaggcaaccctcctgcaccgaggaggagagagttttgggt
gaagaccgagcagctgagctgtctcgcctgactggcatgttcatcctgagacggacgcag
gagatcatcaaccggtacctgccccctcgtcttgactggacacttttctgtgacccatcc
cctctgcagctagagctttacaggcatctcctgtgccatcgagtcttcagagcctgcctt
cagggctccacgcaaacacacacacacctggcctgcatcactgcactgaagaagctgtgt
aaccaccccggcctgctctactccaccgtcaaggagagactaaaccacggatcagaggag
agttcaatatatgatggattggtcgatcttttcccagaatcctactcgtcaggaggattg
aacatgaccgattcaggaaaactccttgttctgtcggacctgttgactgccatcagacag
ctcaacccttcagacagggtggtcgtagtgtccaactacactcaaactcttgacttgctc
caagacttctgtgtgcacatgggctacaccttctgccgactagacggacacacgcctacc
aacaagagacagcgactggtggacagtttcaacagctcctattctccgaactttgtgttt
ctcctgagctccaaggcaggaggtgtgggacttaatctgatcggtgcttcccatctggtg
ctctatgatattgactggaaccctgccaacgatattcaggccatggctcgagtgtggaga
gatggacagaagaagaccgtgcacatctatcgtctcctcactgcaggaactattgaggag
cgtattttccagagacaggtctccaaacaggggctttctgggactgtggtggacctgggt
aaaggcgctgaacacaccagcttctcctccaatgaactgcgagatcttttcagcttgacg
gacacgccgtctctaactcatgacctgctgaactgtagctgcagcatggacggatcggtc
caggcagccgtggaggaggaggtcccggtttttgacaggccgtgccagctcggacgtcaa
ggtgaccgtggaggggtagctgtgccgaagcatctcagcatgtctgagctgatgcagtgg
agacacttctctggtgacacgcacacctttgcagacccctacctcgataatgcacgaaac
cacatcacattcgccttccagaccaccatctctcacacagtgaatacacatgcgcttcag
ctatag
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