Paralichthys olivaceus (Japanese flounder): 109644778
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Entry
109644778 CDS
T06037
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109644778 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pov01009
]
109644778 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109644778 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109644778 (rb1cc1)
Protein phosphatases and associated proteins [BR:
pov01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109644778 (rb1cc1)
Membrane trafficking [BR:
pov04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109644778 (rb1cc1)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109644778 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
109644778
NCBI-ProteinID:
XP_019965789
LinkDB
All DBs
Position
Unknown
AA seq
1632 aa
AA seq
DB search
MKLYVFQVNNGCTLTFDTDLAVQTVLELKHAIQAKYKIATQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVKFDSAYANYQH
ELEEIKVKLTKLGTAVSVMARIPLLESLTRHSYRESMEKSSSTPGKDSDETEEEKSTESV
LYTADAKRPSKLSASFSASEAATCKPAGDQETNEMTDSGGLRAALLDDDDDDDDDDDDDT
PEFANSSSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIEPFLTDCRDTIAKLD
NQNMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLS
HTNQLMIMLNNHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDSEKLQALLRL
LTELLERVRVVEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKR
ESFGKLFRKSFLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLEDLQYLKSCCPVEVQ
PFLMVPTMCDFEPLHRHVETLHQLVQAAQSVDEMSQTITDLLNEQRASYCHSSHRSTLLT
PQSESIPGTTTPVSSKTPTSLSLQGPGCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHP
NMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEGNLTSPNPISDPTSPDMMVESLYSSV
INAIDNKRMQDTTTLERENLRITVLKQVIEKYQSAAEESHSNLRSVKDDLHHLRGLVLKE
QHDFGFVLRNMTTEVRSVVDNFCLTHELKLKEKHQSELLSVRQELEKQVQTLMEENQVNQ
NIVRDVQRAMLELEGLMERKEKELTQLENERERWMETERGQRDRIKNLEQMISDRAEEIE
TLSVARTSLASQLENLHFEIERGQQKIRQELEAVEKSHLKELEVRMMQEHKAQLEALTKD
NKEALEHLAAENSAKLSEDAAQHATALREKENQIKDLEARITELAELRCKLEVELALKES
ETEEVRLLFEEAKTQQAEAVKSQVEAETNVLGKELADVTKQLQVKNEEYEVGLAELRSLM
RIEKDHCISELVDRHEEETILLRHELSSLQQQSQDAERNYSEQQQKLKQELEQQVAQSEE
KEKQFRSFQELEQELRTLVNKLQRENDLLSKKVEQDRRATETELEKQESTKVASPEAFKE
FEQQKEEMENRLLKKIKQLESELHERRSSKSDEGSSLHAEEHADAGAPLSLDSALQERLQ
QERASLQSQIELLEKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTDKLQQ
VTQQQEKDKALIETLSEDRASVMQEKKHLEEELNRLRSTALISSAFFTPHPSAPEVTEAG
AAAARALPVAGSCSSEPMAESDRLASVAEFRDDENVDSAVEASMVTVHDNIVMSEEKQRI
LLLERTLHMKEEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYV
LFTVGPTLYFLHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKF
YRVKAVPWNRKV
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggctgcacgctgacatttgacactgacctt
gctgtccaaaccgtacttgagcttaaacatgccatccaagccaaatataagattgcaact
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagacgagtctgc
agctacagtgctggcactgaaaccaatcccatattcttgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtc
aaggtggaggagtctctactgatgccagctgtttttcacactgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaagaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgctatcatggcgaatctggacgactgc
actctgtcttatcagaagttgcttgtgaagtttgactctgcatacgcaaattatcaacat
gagttagaagaaattaaggtgaaacttacaaagttagggacagcggtttctgtaatggct
aggatacctctgctggaaagtttgacaagacacagttacagagagagcatggagaagtcc
agttcaaccccagggaaggactcagatgagacagaagaagaaaagtccactgagtctgtg
ctctacactgctgatgcaaagaggccctccaagttatcagcatccttctctgcttcggaa
gcggccacgtgtaagccagcaggtgaccaggaaacaaatgaaatgactgacagtggtggg
ctgagagctgcgctattagatgatgatgatgatgatgacgacgatgatgacgacgacact
cctgagtttgccaactcgtcctccttcaacgtcacactattagactggatcaatgtgcaa
gacagacccaatgatgtggaatcagttgtgaggaaatgctttgactccatcaataggctt
gacccacggatcattgaacccttcctgacagattgtcgtgacacaattgctaagttggat
aatcaaaacatgaaagccatcaaggggcttgaggacaggttgtatgctcttgaccaaatg
atagcaagctgtaagaagttggtgaacgaacaaaaagaacttgctcagggatttttggcc
aatcagaagcgtgctgaaaacctgaaggatacatctgttctgcctgacttgtgtctgagt
cacaccaaccagctgatgatcatgctgaacaaccacaggaagctgcttgacatcaaaaag
aagtgcactactgccaaacaagaacttgcaaacaaccttcaagtcagactcaaatggtgc
tgctacgtgatgcttcatgcagaccaggacagtgagaagcttcaggctctactcagactc
ctgacagagctgttggaaagagtgagagtggtggaggccctcagtactgtgccccagatg
tactgcttggcggtggtggaagtcgtcaggagaaaaatgtttatgcgccactaccgagag
tgggcctatgcacttgtgaaggatgggaaacgactgtacgaggctgagaaattcaaaagg
gaatcctttgggaaactctttaggaagtctttcctcagaaatcgtttgtttagaggactc
gattcatggcctccaacatcattctgtacacgaaagccgagaaggtttgacgatgaactt
ccagacatctcacttgaggacctgcagtacttgaaatcttgttgtcctgtcgaggtgcag
cctttccttatggttcctacaatgtgtgactttgagcccttacatcgccatgtggagacg
cttcaccagctggtccaggcagctcagagtgtggatgagatgtcccaaactatcaccgac
ctgttgaacgaacaaagggcatcctattgtcatagttctcatagatcaaccttgctgacc
ccacagtctgaaagtatacctgggaccaccacaccagtgtcctccaaaacccccacctct
cttagccttcagggtccaggctgccaacccctacatgttcctgtcccagctcctttggag
gacttgtccccagacagcattgatgcacaaacatttgactttgaaaccatcggccatccg
aacatggatccagtcctgcagcagggctccctcgacctggattctctagcagagagccca
gagtcagatttcatgtctgctgtcaatgagtttgtgatcgaagggaacttgacctccccg
aaccccatcagtgaccccactagccctgacatgatggtagagtctctgtactcttcagtg
atcaacgctatagacaataagcgtatgcaggacaccacaacactagagagggagaatctt
aggatcactgtcctcaaacaagttattgagaagtatcagtctgctgcagaggagtcccat
tctaacttaagaagtgtaaaggatgatctccatcacttaagaggtctagtgttaaaagaa
caacatgactttggctttgtcctgaggaatatgaccacagaggtgcgcagcgttgtggac
aacttctgcctgacccatgaactgaagttgaaggagaagcatcaaagtgagctgctctct
gttcggcaagagcttgagaagcaggttcagacactaatggaggaaaatcaagtaaaccag
aacattgtaagagacgtccagcgtgcgatgctcgagctggagggacttatggagcgcaaa
gagaaagaacttactcagctcgagaatgagagagagcgatggatggaaacagagagaggc
cagagggataggatcaaaaatctggagcagatgatcagtgatcgagctgaagagatcgag
acgctttcagttgcaagaacttccctggccagccagcttgagaatctgcactttgagatt
gaacgtggccagcagaagattcgacaggagttggaagctgttgagaaatctcacttaaag
gagctggaggtcagaatgatgcaggagcacaaggcacagctggaggctcttactaaggat
aacaaggaggctctagaacatctggctgctgaaaacagtgcaaaattaagtgaggacgct
gctcaacatgccactgctctcagagagaaggaaaaccaaatcaaggacttggaggctcgt
ataactgagcttgctgaactgcgttgcaaactcgaggtggaattagccctcaaagagtca
gagactgaggaggtgagactcttatttgaggaggccaagactcagcaggccgaggctgtg
aagtctcaggttgaagctgagaccaatgtcctcggcaaagagctggcagatgtcacaaaa
cagcttcaggtaaaaaatgaggagtatgaagtgggcctggcagagttgaggagtctcatg
aggattgagaaggaccactgtatctccgagctggtggacagacacgaggaggaaactatc
ttgttgcgccatgagctctcctccctgcagcagcaatcccaggatgctgagaggaactat
tcagagcagcaacagaagcttaagcaggaattagagcagcaagtggctcaaagtgaggaa
aaagaaaagcagttcaggagtttccaagaactggagcaagagctgaggactcttgtcaac
aaactgcagagagaaaatgatctgctctccaaaaaagtagagcaggacagacgagccact
gagacagaactagaaaaacaagagtccactaaggttgcatcaccagaagcctttaaagag
tttgagcagcagaaggaggagatggaaaacagactgttaaagaaaatcaaacaacttgag
agtgagctccatgagagacgatcttcaaaaagtgatgaagggtcgtcgctgcacgctgag
gaacatgcagatgctggagcacctctctctctggactctgcactacaagagcggctgcag
caggagagggcctcgctacagtcccagatagagctcctggagaagaagaagaatgaagag
atacagaacctcaagacatcactaattgcagaacagcagactaatttcaacactgttcta
acccgagagaagctgaagaaggagcagatcatcaatgagctcacagacaagctgcagcaa
gtgacccaacagcaggagaaggacaaagctctgatagagactctctctgaggaccgggcg
agtgtcatgcaggagaagaaacacttggaagaagaacttaatcgcctgcgcagcactgca
ctgatctcctctgccttcttcacccctcacccatcagccccggaggtcacagaggcggga
gcagcagcagccagagctctgcctgttgctgggtcctgctcctctgagcccatggctgaa
agtgacagactggcctctgtagcagaattccgagatgacgaaaatgtcgactcagcggtg
gaagccagcatggtgacagtccatgataatatcgtgatgtcagaggagaaacagcggata
ctcttactcgagaggactttacacatgaaggaagaagagaacaagcgcctcagtcaaaga
ctgatgtcccagagcatgtcgtctgtgtcgtcacggcattcagacaaaatcgccatcaga
gacttccaggttggtgatttggttctaatcatcctggatgaaagacacgacaactatgtg
ctgttcacggtcggacccaccctctacttcctccactcagagtctctcactgcactggac
ctcaaaccagcatcagggacttcaagacggccgtgggttcttggaaaagtgatggaaaag
gaatattgccaggcaaaaaaggcccagaacaggttcaaggtccctttaggaaccaagttc
tacagagtgaaagctgttccatggaacagaaaagtataa
DBGET
integrated database retrieval system
