KEGG   Paralichthys olivaceus (Japanese flounder): 109644826
Entry
109644826         CDS       T06037                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pov03032]
    109644826 (rif1)
DNA replication proteins [BR:pov03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    109644826 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4 HIRA_B
Other DBs
NCBI-GeneID: 109644826
NCBI-ProteinID: XP_019965838
LinkDB
Position
Unknown
AA seq 2415 aa
MMATAAPPCSSSLLPLLESLEDSAAGQSEHTDAYLTIANRLSGEEARQFLPAVEKHFSRL
GKVLLIHITSPNAELSQAALQALGFCVYHSHVVSGVPEAFAAEILSALCSLVVKSTDKNT
CTRALWVISKQSFPPDVVSKKVSSILGTLESVWSREDIQSVVMEHEALNVIIRMLEQVPA
PMGDGAVRWAKLIIPLVVHSASKVRLRAAAAMEMGMHLLLEKQTEVAAIIEPMMSSKLIP
ELQKLFMSKNEMNVLKLWPLFVKLLGKMLHRGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFSLNPDILCSAKRMKLLMQPLASIHVRTEALLLTKVEVWWYLVVQLGPNLSS
NFDQVSVPLLQCTIGCDSPSVPSTPSRAVTQNGAVTPGTPKTAATPGFNSPANTSRMSLN
SSVQVPTTFPSIQLLGLEMLLNYFLGPETVATAAKRKLTLSLEPLNHPLVSGASSFSKHA
AVLISNIRDGFINVGKDAPDALLNVLWTSLVRFVNMTIESGGSKKERQGCEVLTLMLQAL
QSIVTSEALPADKVLVLLEATLKGIPQRVLGSASYQVGKMDVLNGTPALFLILLLYNSSL
LSAYIEDERFFQCLQTLVGCGLSGHTSPLAFAEAVLGAIGGSAASLQSKEQLWRMWSVMV
GPLTDTITQSNEVNQGDALEHNFSAMHSALLFPITHLLRGSPLQQASQKSMLSTWSKLYK
VFARCSALVVTAEENVCCEELCAKMAASIDRDALKVPSTLNAVASLLQVMVECVDFSPYS
PQFQQKLKSPHTPVNWMRKRNKALGNLSTFQSLLVQCLEVYLQAPDVSFEATGVSLLSVM
SALFTNLILANVVQETLASLVQPLSLFYKHAASEPPEFTSQILTKLEKLLGDVLGCVQSR
SALPFNNELLALLSPLLCVLFPHKNKQLRTSVTQFWNSTFANSVSLTYPEEIRPILSQVK
QKIPIILPGFEVVAVSEELSGQYSGESSQLETKLSGIPVLSVGKRDSLLGKDKSSPKTSK
PVSTKLDFGSPKPPRREVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMYNN
LDASLDTTVFTQYTQSQEDSSEKLQTEQADEVPTEAPDKVPQEDMENEETNKIAARETGD
CPKEKETENHQHEEMIPEPSDVSMEDDAKSGDTAEDMDVQSKDGSSPNISSSSDLVSGTP
QKPNSRRQSFITLEKYAEGKPSSPSSTSTFTGPLVKSSNSQERSNTSKASSSQASQTSTG
PSSLDSQSPGRMESQHPVNNASESPRRPKDSGIKSEPVRLTERLPSDTTEDEDVIPDTQT
EAEETSSQEEELNDSQSSMSQNSQKETRRSGRRRVKPVLLGDKPEEREEKHNVKRRRSGE
KLNNDSPNSDPTQNRVTRRSQQLAEEAGSRDGLRLRAQRDNSETSQTESQGRAHKKIKLY
SNSDELLDNPEPRRGRRRSTIEQESSQTDLQSDSDSQSKRKRGRPRKVSLEIKRTKDLHE
KEQSRQIASHEVDLVEQKEKDDHEQKNDSQIVTLSPQTGARSQEVELVEQTEKDAVKPKD
SQILTSSQTDGQSPDLELVEETKKEKGDCSILVSTSEAQDGTDATNQLENESEVKGKPET
STSINDDLSQEDSEVITPVSSESQSRRRSSRSKPSSEAAESEDKSDSQSSSGRRSRSNSK
TTESAVAQAEASIGGKTRRSKAQEDLSKSTPGSTPEGSQSSDVPGSSESKGRGRYSRRKS
SPGLVASLESSESESSQARDVTVMPKKRGRKPRASLPIPLVVDSKIDGIDKDVTQNVVKD
SQEADTQIMEATAETVSDEVQDKVEMEEQRNHESPTEVEADAVVASEPVVPEKSETDDTE
RTDVSPSKNEQRDSPTETDDTSSQDTEAFEVPEAVGVSNEQIQEDSPPAVGTLVSPDETT
ETPQVSECPEDKAEDVSETGDSDKENEKADSDQEHPVVPVEDASPDGNQVEFPNVIDEPS
KEEEPSDQPTEVSVDEDITPLPENDDDDRSTQMPECREEEQTPAADAETDVVVNLDAALT
DLCDAPVSADASVKDAFQDSPVRQKDLEAVMGLDVGQSPSGGRTRGTWSPSASPSTSILK
KGQKRPLEDETPSPLVKSRRVSFANPIQRQEIADDIDRRSPAIRTSSPRRSKVSAIPQPK
YVTTPTKGLLILSPRNLRSPGSKSSKKCLISEMSQEPRPVPRDCIYPALVGCSAPVEAVL
PQISSTLWSRGFGQLVRARNIKTVGDLSALTPHEIKTLPIRSPKISNVKKALKFYEQQRK
GRGGDELKSFDEMEMMTSELEETSAPQNQEDEDKTSGETLATELVDEPVPADETSHQDVS
ANQTPDTPTGAEREGPLHDDGLLSDVEALTCRMTPLELSRCSPQQLVRMHDQLGGMMSRV
VVELQTRLCQTDGKT
NT seq 7248 nt   +upstreamnt  +downstreamnt
atgatggcgacggcggcgcctccctgcagctcgagcctcctccctctgctggagtctctg
gaggacagcgctgctggacagtccgagcacacagacgcctacctcaccatagccaatcgc
ctcagtggagaagaagctcgccagtttctccctgcagttgaaaagcacttttcccgtctc
ggtaaagtcctcttgatccacatcaccagtccgaacgcagagctgagtcaagccgccctg
caggcgttgggcttttgcgtgtaccattctcacgttgtctccggagtgcctgaagccttt
gccgcagaaatactgtcagcactttgctccctggtggtgaagtcgacggacaagaacaca
tgcaccagagcattatgggtcatctccaaacagagctttcctccagatgtagtttccaaa
aaagtgtcgtccatactgggaactctggagagtgtgtggagcagagaagacatccagtct
gttgtcatggagcatgaagccttgaacgttatcatcaggatgctggagcaggttccggct
ccgatgggcgatggagcagtgcgatgggcgaagctgatcattcctctggtcgttcactcc
gcctccaaggtgcgtctacgcgcagcggccgccatggagatggggatgcaccttctgctg
gagaaacagacggaggtggccgctatcatcgaaccgatgatgtcgtcgaaactgatccca
gagctgcagaagcttttcatgtccaagaatgaaatgaacgtcctgaagctctggcctcta
tttgtgaagctgctcgggaagatgctgcacagaggaggtcccttcatcaactctctgctg
catctggaggagctcggattccgcagctcctctcccactatcaagaagatcgccttcatc
gcctggaaaagcctcatcgacaacttctccctcaatccagacatcctgtgcagcgccaaa
cgcatgaagctcctgatgcagccgctcgcgtccatccacgtcaggacagaagctctgctg
ctcaccaaggtggaggtgtggtggtacctggtggtgcaactgggacccaacctgtcgtcc
aacttcgatcaggtttccgtgcctttgctgcagtgcaccatcggatgtgactccccctcg
gtcccgtccactccgtctagagccgtcacccaaaatggtgccgttacacctggaacaccc
aaaaccgcggccactccgggcttcaacagtccagccaacacgtctcgaatgagcctgaac
tccagcgtccaggtccccaccaccttcccctccatccagctgctcggcctggagatgctg
ctcaactattttctgggacccgagactgttgccacggcagcaaaaagaaaactcaccctg
agtctcgagcccctgaaccacccgctcgtctccggcgcctcctccttctccaaacatgct
gctgttctcatctcaaacatcagagatggattcatcaatgtcggcaaagacgctccagat
gctcttctgaacgttttatggacgagtcttgtgcgttttgtcaacatgaccatagagtct
ggaggcagcaagaaggagcgtcagggctgtgaagttctcaccctgatgcttcaggccctg
cagagcatcgtcacctcagaagctctgcctgctgacaaagtcctggttctgctggaggcc
acgctgaagggaattcctcagagagttcttggctctgcctcttaccaggtcggcaagatg
gacgtgctcaatggaacaccagctctttttctcatcctcctcctctacaacagcagcctg
ctctcagcctacatcgaggacgagagattctttcagtgccttcaaactctggtgggctgc
ggcctgtcgggccacacctcccctctggcgttcgccgaggcggtgctcggtgccatcgga
ggcagcgccgcgtctctgcagagcaaggagcagctgtggaggatgtggagcgtgatggtc
ggtccgctcacagacaccatcacacagtctaatgaagtgaaccaaggtgatgctctggag
cacaacttcagcgccatgcactctgcgctgctcttccccatcacacaccttctacggggc
tcccctctgcagcaggcgtcccagaagtccatgttgtccacgtggtccaaactgtacaag
gtgttcgcccgctgctcagcgctggtggtcacggccgaggagaacgtctgctgcgaggag
ctctgtgcgaagatggcggcttcgatcgacagagacgcgctgaaggtcccctctacttta
aatgcagttgccagcctcctccaggtgatggtggagtgtgtggacttctctccgtactct
cctcagtttcagcagaagctaaagtctcctcacactcctgtgaactggatgaggaagagg
aacaaggctctggggaacttgtccacgtttcagtccctgctggtccagtgtctggaggtt
tatctccaggcccccgacgtgtcgtttgaggccacaggagtctcgctgctctccgtcatg
tcggctctcttcaccaatctcatcctcgccaacgtcgtccaggagacgctcgcttctctg
gttcaacctctctcactcttctacaaacacgcagccagcgagccgcccgagttcacatcg
cagattctgacaaagctggagaagcttcttggtgacgtcctgggctgcgttcagagccgc
tctgcgttgcccttcaataacgagctgctggctctgctctctcctctgctgtgtgtgttg
ttcccacacaagaacaagcagcttcgcacgtcggtcactcagttctggaactccaccttc
gccaactcggtcagcctcacttaccccgaagagatcagaccgatcctgagccaagtgaag
cagaagatcccgatcattcttcccggctttgaggtcgtcgcggtttctgaagagctcagt
ggccaatattcaggtgagagttcccagttagagaccaagctcagcgggattcctgttttg
tcagtgggaaagagggactcgctgctggggaaggacaagagctccccgaagacgtccaag
ccagtttctacaaagctggattttggctctcccaagcccccccgccgagaggttttggag
gaagaggcctccatcgactttgtcttcattcctcctgagacgaaggagagagttttgaca
gagcaccagaaggaggtgaaaaggactaaaagggttgatattccggccatgtacaacaac
cttgacgcttctctggatacaacagttttcactcagtacactcagagccaagaggactct
tcggagaaactgcaaacagaacaagctgacgaggtccccacagaagctcctgacaaggtt
ccacaggaagatatggaaaatgaagaaaccaataaaattgcagcaagagagactggagac
tgcccgaaagaaaaagagactgagaaccaccagcatgaagaaatgatccctgagccatca
gatgtttccatggaggacgatgccaagagtggtgatacagcagaagacatggacgtacag
tctaaagacggctcaagtcctaacatctccagctcctcagatttggtctcagggacgcct
cagaaacccaacagtcggcgtcagtcctttatcactctggagaagtatgctgagggaaaa
ccctccagccccagcagtacgtccacattcacaggtcctctcgtcaagtcgtccaatagc
caagaacgctccaacaccagcaaggcatcgtcttctcaggcttcacagacatccactggt
ccaagctctctggattcccaatcccctggaagaatggaatcgcagcatcctgttaacaat
gcctccgagtcccctcgaagaccgaaagactctgggattaaaagcgagcccgtcaggctg
actgagagactgcccagtgacacgacagaggacgaagatgttatcccagacacccaaact
gaagcggaggaaacatcgagtcaggaagaggaattgaacgattctcagtcctctatgtcg
cagaattctcaaaaggaaaccagacgatctgggcgccgcagagtcaaaccggtgctgctc
ggagacaaacctgaagaacgggaagaaaaacacaatgttaaaaggagacgttctggagag
aagctcaacaatgattctccgaactcggacccaacacagaacagagtaaccaggagaagt
cagcagttagctgaggaagctggcagcagggatggattacgattgagggctcagagggac
aacagtgagacgagccaaaccgagtctcagggtagagcccacaagaaaatcaaactgtac
agcaattcagatgagttactcgataaccctgaacccagaagaggaaggagaagaagcacc
atagagcaagagtccagtcaaactgatctgcagtccgacagtgacagccagtcaaagaga
aagcgcggtcgcccaagaaaagtatcattagagattaagagaacgaaggatttgcatgag
aaagaacagtctagacaaattgcctcacatgaagttgatcttgtagaacagaaggaaaag
gatgatcatgaacaaaagaacgactctcagattgttactctttccccacaaactggtgcc
agatcccaagaggttgaacttgtggaacaaactgaaaaagatgccgttaagccaaaagat
tctcaaatcctgacctcttctcaaactgatggccaatccccagatttagagcttgtagaa
gagaccaaaaaggaaaagggagattgttcaatattggtctcaaccagcgaggcccaagac
ggaaccgacgcaacaaaccagctggagaatgaatctgaggtcaaaggcaaaccagaaaca
agcactagcattaatgatgacctcagtcaagaggactctgaagtgatcacacctgtatct
tctgaaagccagtctcggcgtagatccagtagaagcaagccctcatctgaggcagcggag
tccgaagacaagagtgacagtcagtcttcatcaggaagacggagtcggtccaattcaaag
acaactgaatcagctgttgctcaggcggaggccagcattggaggtaaaaccagaagaagc
aaagcacaagaagatttgtccaaatcaactcctggctcaaccccagagggttctcagtcg
tcagatgttcctggatcatcagagtccaaaggcaggggcagatactccagacgaaagtct
tccccagggttagtggccagtttggagtcttcagagtctgaatcctcgcaggccagagac
gttactgtcatgcccaaaaagagagggaggaaaccgcgagcttcactcccgattcctctc
gtcgtcgattctaaaatagatggaatcgataaggatgtgacacagaatgttgttaaagat
tctcaagaagcagatacgcaaataatggaagccacggctgagacggtttcagatgaagtc
caggataaagttgaaatggaggagcaacgtaaccacgaatcaccaacggaggtagaggct
gatgctgttgtggcctcggagcccgtcgttcctgagaaatctgagaccgatgacacagag
agaaccgatgtgtcaccgagcaagaacgagcaaagagactctccaacagaaactgatgat
acgtcttctcaagacactgaggccttcgaagtgcctgaagcagttggggtcagtaatgag
cagatacaggaagattcgccacctgctgttggaacgctggtgtctccggatgagacgacg
gagacacctcaggtctcagagtgtccagaggacaaagctgaagacgtttctgaaactggg
gacagtgataaagaaaatgaaaaagctgattcggaccaagaacatccagttgttccagtg
gaagatgcatctccagatggaaaccaggttgagtttccaaatgtcatagatgagccttca
aaagaggaggagccgtcggaccagcccacagaggtcagcgtggacgaagacatcacacct
ctaccggagaatgatgatgatgacagaagcacccagatgccggagtgtcgggaggaagag
caaacgccggcggccgatgctgagaccgatgtagtcgtgaacttggatgcggctcttaca
gatctgtgcgatgctccggtgtctgcggacgcttctgtcaaagatgcttttcaggattct
ccagtgaggcagaaggacctggaggctgtcatgggcttagatgttggccagagccccagc
ggaggcaggaccagaggaacctggtctccctcagcctccccctccaccagtattctgaag
aagggccagaagagaccactagaggatgagaccccctcgcctctcgtcaaatccagacgc
gtgtcttttgccaatccgatccagcggcaggaaatcgcggacgacattgatcgtcgcagc
cccgccatcagaaccagttctcccagaagatccaaagttagcgctatccctcaacccaaa
tatgtcacgactccgacgaagggcttgctgatcctgagccccaggaatctgcgcagtcca
ggttccaagagctccaagaaatgcctgatttctgagatgagccaggagcctcgtcctgtc
cccagagactgcatctatccggccctggtcggctgctctgcacccgtagaagctgtgctg
cctcagatttcctccaccttgtggtcccgggggttcgggcagctcgttcgagccagaaac
atcaaaacggtcggagacctcagcgctttaactccccacgagatcaagactctgcccatc
cgctccccgaagatctccaatgtcaagaaggcacttaagttttacgaacagcagcgtaaa
ggtcgaggtggtgacgagttgaagagttttgatgaaatggagatgatgacgtctgaactg
gaggagaccagtgctcctcaaaaccaggaggacgaggataagacctcaggcgagactctc
gcaacggagctggtggacgaacccgttcctgcagatgaaacatcgcaccaggacgtctcc
gctaatcaaacgcccgacacgccgacaggagcagaacgggaaggaccgcttcacgatgac
gggctcctgtcggacgtggaggccctcacctgcaggatgacgccactagaactcagtcgc
tgctcgccgcagcagctcgtccggatgcacgatcagctgggaggcatgatgagccgcgtg
gtggtcgagctgcagacgcgcctctgccagacggacggcaaaacatga

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