Paralichthys olivaceus (Japanese flounder): 109644948
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Entry
109644948 CDS
T06037
Symbol
trpm1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pov04040
]
109644948 (trpm1)
Ion channels [BR:
pov04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109644948 (trpm1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
YVC1_C
Damicornin
Motif
Other DBs
NCBI-GeneID:
109644948
NCBI-ProteinID:
XP_019965983
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MSLVALENSELVFLQVHRVWIERTFQKRECIQIIPSKDASRCSCGQLVTQHTAILPGAKE
EGAPLVQLEVQTAERWSPLKHTQTSPTDSYGVIEFQGGGHVNKAMYIRVSYDSKPDSLLH
LMVKDWQLELPTLLISVHGGLQNFDLPPKLKQVFGKGLIKAAVTTGAWIFTGGVSTGVIR
HVGDALKDHSSKSRGKVYAIGIAPWGIIENKEDLIGRDVTRSYQTMSNPLSKLSVLNGSH
SHFILSDNGTTGKYGAEVRLRRQLEKHIALQKINTRLGQGVPVVCLILEGGPNVISIVLE
SLKEDPPVPVVICDGSGRASDIISFAHRYCEEDGLVSDSVKDQLLVTIQKTFNYSRSQAQ
QIFLMVMECMKKRALITVFRMGSEGQQDIEMSILTALLKGTNASASDQLSLALAWNRVDI
ARSQIFVYGHHWPPVRVGDRPKSPVAQRGGGGAGGGGGGKGKARAKKGKGGKTKVEPPEE
TDPRKLELLSWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLEELYNTKLGP
ANTLHFVVRDVKKGNLPPDYQITLIDIGLVLEFLMGGAYRCKYTRKSFRTLYNNLYGLKR
PKALKLLGMEDDEPRSKGKGKKNKKKEEEVDIDVDDPEVSRFQYPFHELMVWAVLLKRQK
MALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLENNSREFGQLAYELLDQ
SYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGCLRMGKS
NSLKVILGIVFPPAILLMDFRLGEEASFHTTKENEDGKSKDDDNKSSKDAVSNVDATSKK
GDEEENQKKHRRRVPIGRQIYEFYNAPFTKFWFNTISYLVYLMLYNYIILVKMERWPSLQ
EWIVISYIITLGLEKVRQILMSEPGKLKQKINVWLEDYWNITDLAAISVFLLGLLLRLQN
EPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSF
GVARQAILHPDEKPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGDNLYDEDGK
KLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMT
FHDRPILPPPLIVFPHIYIILKRLCCHCRRRPEGEHDDRERRLQLVLSPDELKSLHEFEE
QCVEEYFREKDDEKQSSNNERIRVTCERVENMFMRLEEVNEREHSMKASLQTVDLRLAQL
EEFSGRMMNALEKLAGVDRADLVRSRSRGSSVCEPAALLRHGSINSADGYSLYRYQLEHD
DRVSVSGDTEANDKKVKEFGSTLEVKGPRDRTQSLSNVDILISPCDPDLQTTHTRPASPQ
MDLTDADVKKPPEKSRLEAVASFPLETSKVTEYLSSATLSVTASSSRKSISSIVYSPAHQ
VQDAAVSLTPHRASTMTEERGGGTETKQKVEPPGSSDGEQGGEPSVGNLGKGEGEESSEL
LLVGEDRMYPTLRSKSLNVNPRKTRKKEGEETPRSASSVRDLVSAFSGGAGDTRPDPGSD
PGPSPGSGL
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagttgcattagaaaactcagagcttgtttttcttcaggttcacagagtttgg
atcgagaggacgttccagaaaagagaatgtatccagatcattcccagcaaagacgccagc
aggtgcagctgtggtcagctggtgactcagcacactgccatcctcccgggggccaaagag
gagggggccccactggttcagctggaggtccaaactgcagagagatggagtcccctcaaa
cacacccagacctcccccaccgattcctatggagtcattgagttccagggaggaggacat
gtcaacaaggccatgtacatcagggtctcctatgactctaaaccggactccctgctccac
ctgatggtgaaggactggcagctggagctccctacgttgctcatctctgtccacggaggc
cttcagaactttgaccttccgcccaaactcaagcaggtttttgggaagggactgatcaaa
gccgctgtgaccaccggagcttggatcttcaccggaggagtcagcacaggagtgatccgc
catgttggagacgctctcaaagatcattcgtccaagtccagagggaaagtctatgctatc
ggcatcgcaccgtgggggatcatcgaaaacaaagaagacctgatagggagagacgtgact
cggtcgtatcagaccatgtccaacccgctcagcaaactgtcggtcctgaacggcagccac
tcacacttcatcctgtccgacaacgggaccaccgggaagtatggtgccgaggtccgtctc
cgccgccagctggagaaacacattgctctgcagaagatcaacacacgtctgggtcagggg
gtcccggtggtgtgtctgatacttgaggggggtcctaacgtcatctccatcgtgctggag
agtctgaaggaggatcctcctgtccctgttgtgatctgtgacggcagcggtcgagcctct
gacatcatttcctttgctcacagatattgtgaggaggacgggctggtgagtgacagcgtc
aaagatcagctgctggtcaccatccagaaaaccttcaactacagccgcagccaggcgcag
cagatcttcctcatggtgatggagtgcatgaagaagagagctctgatcacagtattcagg
atgggctcagagggtcaacaggacattgagatgtcgatcctcacagctcttctcaaaggt
accaatgcatcagcgtcagatcagctgagtttggctttggcctggaacagagtggacatc
gctcgtagtcagatctttgtgtacggacaccactggcctcctgtgagagtcggagatcga
cctaagagccctgtggcccagagaggagggggaggggcaggagggggagggggaggaaaa
ggtaaagccagagcgaaaaagggaaaaggaggaaaaactaaagttgaacctcctgaagag
accgacccaagaaaactggagctgctgagctgggtgaactctctggaacaggccatgatg
gacgctctagttctggacagagttgactttgtgaagctgttgattgaaaacggtgtgaac
atccatcacttcctgaccatccctcgactggaggagctgtacaacacgaagttgggtcct
gccaacacgctgcactttgtggtccgagatgtgaaaaaggggaacctccctccagattac
cagatcacgctgattgacatcggtctggtgctggagtttctgatgggtggagcatatcgc
tgcaaatacaccaggaagagcttcaggacgctgtacaacaacctgtatggtctgaaaaga
ccaaaagctctgaaacttcttgggatggaggacgatgagcctcgttcgaagggaaaagga
aagaagaataagaagaaggaggaggaggtggacatagacgttgatgaccctgaggtcagc
aggtttcagtaccctttccatgagctgatggtgtgggcagtgctgttgaagcgccagaag
atggcgctgttcctgtggcagcggggggaggaggccatggccaaagctttggtggcctgt
aaactctacaaggcaatggcccatgagtcgtctcagagcgagctggtggacgacatctac
caggacctggagaacaactccagggagtttggtcagctagcctacgagctcctggatcag
tcatacaaacacgatgagcaggtcgccatgaagctgctgacgtacgaactgaaaaactgg
agtaactccacctgtctgaagttagctgttgctgccaaacacagagacttcatcgctcac
acctgcagccagatgttgctgacggacatgtggatgggctgtttaaggatgggcaagagc
aacagcctcaaggtgattttagggatcgttttccctcctgccatcctcctcatggacttt
cgtcttggagaggaagcttcatttcatacgaccaaagaaaatgaggacggcaaaagtaaa
gatgacgacaacaaatccagcaaggatgccgtctctaatgttgacgctacatcaaagaaa
ggagacgaagaagaaaaccagaagaaacatcgcaggagggttcccatcgggaggcagatc
tacgagttctacaacgctcccttcaccaagttctggttcaacacgatctcgtacctggtc
tacctgatgttgtacaactacatcatcctggtgaagatggagcgatggccctctctgcag
gagtggatcgtcatctcttacatcatcactctggggctggagaaagtcagacagatcctg
atgtcggagccggggaagctgaagcagaagatcaacgtgtggttggaggattactggaac
atcaccgacctggcggccatctccgtcttcctgctgggtttactgctgcggctgcagaat
gagccctacatgggctacggacgcgtcatctactgcgtcgacatcatcttctggtacatc
cgagtcctggacatctttggagtcaacaagtacctgggaccctacgtcatgatgatcggg
aagatgatgattgacatgctgtacttcgtggtcatcatgctcgtggtgttgatgagcttc
ggcgtcgctcgacaagcgatcctccatccagacgagaagcccacgtggcgtctggctcgc
aacatcttctacatgccgtactggatgatctacggagaggtgtttgccgactccatagac
ctttatgcgatggaaatcaatcctccgtgtggagacaacttgtatgatgaagacgggaag
aagcttcctccctgtatccccggagcctggctcactcccgccatcatggcctgctaccta
ctggtcgccaacatcctgctggtcaacctgctcatcgccgtcttcaataacaccttcttc
gaggtgaagtccatctccaaccaggtgtggaagttccagcgatatcagctgatcatgacc
ttccacgaccgtcccatcctgccgcccccgctcatcgtcttcccccacatctacatcatc
ctgaagaggctgtgctgccactgccgccgccggccggagggagagcacgacgaccgcgag
agacgactccagctggtgttgagtccagacgagttaaagtctcttcacgagttcgaggaa
cagtgtgttgaggaatatttcagagagaaagacgacgagaaacaatcgtccaacaacgaa
cgaatcagagtcacatgtgagagggtggagaacatgttcatgcgcctggaggaggtgaac
gagcgcgagcactcgatgaaggcgtccctgcagacggtcgacctccgcctggctcagctg
gaggagttctctggtcggatgatgaacgctctggagaagctggccggcgtcgaccgagcc
gaccttgtccggtcgcgctccagaggatcatcggtgtgtgaaccggccgctctgctgcga
cacggcagcattaacagtgccgacggatacagtctgtaccgataccagctggagcatgac
gacagggtctctgtgtccggagacacagaggcgaatgacaagaaggtgaaggagtttggt
tcgaccctggaggtgaaaggaccgagggacaggactcagtctttgtccaacgttgacatc
ttgatctccccttgcgacccggacctccaaacaacccacacccgacctgcttcccctcag
atggacctaacagacgctgatgtgaagaaaccgcccgagaaaagccgactggaggcggtg
gcatcgttccctctggagacgtcaaaggtcacagaatatttatcctctgcgaccctcagc
gtcaccgcctcctccagcaggaagtcaatcagcagcatcgtctacagcccggcccaccag
gttcaggacgcagccgtcagtttgacaccccacagagcatccaccatgacggaggaaagg
ggcggaggaactgagaccaaacaaaaagtggagcctcctgggtcgtccgatggggagcag
gggggtgagccgtcggttggtaacctgggtaaaggagagggggaggagtcatcggagctg
ctgctggtgggggaggacaggatgtacccgacacttcgctccaagagtctcaacgtcaac
ccgaggaagacgaggaagaaggagggcgaggagacgccgcgctcagctagcagcgtccgg
gacctggtgtcagcgttcagtgggggggcaggggacaccagaccagatccaggttcagat
ccaggtccaagtccaggttcaggtctttga
DBGET
integrated database retrieval system
