Paralichthys olivaceus (Japanese flounder): 109645094
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Entry
109645094 CDS
T06037
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109645094 (taf1b)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109645094 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
Importin_rep_4
Motif
Other DBs
NCBI-GeneID:
109645094
NCBI-ProteinID:
XP_019966162
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
MDEELTAGFRELCAQCSAVDWGISDEGRFYCRSCHNVIERTKEVVDTTFTPGSTRVSTIG
RGTRRRRPDRGRQWMICEGFQFILRNQANALLRLGVSAQFKDPVLCQLWRLYLQKSRQAF
TSNPVRSSVFKVQRPGSDSDSVAMSSAETDGETNLSSPAASNTAESCSDWSQRSGSSDIV
TYLTARQRRSHGLMNMTKTLALIHLALIWSHEPLTLSDLLRLVSEGHVPFINAFEELPEE
MKLDGKDALIFRVESVPSHRVVHRQAQTLLLFLQPQTFPPISRQSLLHPALLSLRYLTDT
NLPDDLHPWVCRLMDDAGLVDFTFDPTSCPVLPHYDIQTAALIIVTMKLIFGLDDHTEWD
LSNESGDQDDSGNMFNLRRWFRLTQAALITAQQKRHHEVARKQWKAKKPLYPSRDSEAVV
MKRKRTAEQVQMCFEKLSSRLVGVQRCDPSSFTFCWGDEDGADGPSLHHKKLDRVLTLKH
NVQTPANTAYWHTALRVCDPQKCRSHYSEVEATLPRSFVWLLQLFSFLLNVKPAYLYEEV
LRVERRVLDSRRHLRRRERTTTTRSEDTIAGC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaactcacggccgggttcagggagctctgtgctcagtgctcggcggtggat
tgggggatttcagacgagggtcgtttctactgcagatcctgccacaatgtcatcgagaga
accaaagaggtggtggacacgaccttcacccccggatccaccagagtctccactattggc
cgagggacgagacgcaggagaccagatcgtggtcgtcagtggatgatctgtgaaggtttt
cagttcatcctgaggaaccaggccaacgctctgctcagactcggagtctctgctcagttc
aaggacccggtgttgtgtcagctgtggagactttacctgcagaagagtcgacaggcgttc
accagcaacccggtgaggagctccgtgtttaaagtgcaacgtccaggatcagactcagac
agtgtagctatgtcgtctgctgagacggacggagagacgaatctgtccagccccgccgcc
tctaacacagcagagagctgcagtgattggtcgcagcgttcgggctcttcagacatcgtc
acctacctgacggcccggcagaggcgcagtcatggtctgatgaacatgacgaagacgttg
gccctgatccacctcgctctgatctggagccacgagccgctgacgctcagcgacctgctc
aggttggtgagcgaaggtcacgtcccgttcataaacgccttcgaggaacttccagaagag
atgaagctcgacggtaaagatgctctcatcttcagagtcgagagcgtcccgtcccaccgg
gtcgttcaccgccaggctcagactctgcttctgttcctgcagcctcaaacgtttcctcca
atcagccgacagagtctgctgcacccggcactgctcagcctgcgctacctgacagacacc
aacctgcctgatgatctccacccgtgggtctgcaggctgatggacgacgccggtttggtt
gatttcacgttcgaccccacgtcttgtcccgtcctgccgcattacgacatccagaccgcc
gccctcatcatcgtcactatgaagctcatcttcggcctggacgaccacacagagtgggat
ttgtccaacgagtcgggtgaccaggacgactcaggaaacatgtttaacctgaggaggtgg
ttcagattgacgcaggctgctctgatcacagctcagcagaaaagacaccacgaggtcgcc
aggaaacagtggaaggccaagaaacctctttacccgagcagagactcagaggctgttgtg
atgaaaaggaaacggacagcagagcaggtccagatgtgttttgaaaagctgtcttctcgt
ctcgtgggggtccagcgctgcgatccgtcgagctttacattctgctggggggatgaggac
ggagcagacggtcccagtctgcaccacaagaagctggaccgagtcttaaccctgaaacac
aacgtccagactccagctaacaccgcatactggcacacggcgctcagagtctgcgacccc
cagaagtgcaggagtcattactcggaggtggaggcgacgctgcctcggtcgttcgtgtgg
ctgctgcagctcttctccttcctgcttaacgtgaagccggcctacctgtacgaggaggtg
ctgagggtggagagacgagtcctcgacagcagacgacacctgaggaggagggagaggacc
acgaccaccaggtccgaggacacgatcgccggctgctga
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