Paralichthys olivaceus (Japanese flounder): 109645351
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Entry
109645351 CDS
T06037
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109645351 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109645351 (nup98)
03036 Chromosome and associated proteins [BR:
pov03036
]
109645351 (nup98)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109645351 (nup98)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109645351 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
109645351
NCBI-ProteinID:
XP_019966497
LinkDB
All DBs
Position
Unknown
AA seq
1706 aa
AA seq
DB search
TGFGATGGFGASTFGATTNTGGLFGATQNKPGGLFGSSTFSQPATSSTSTGFGFGAASGT
STSLFGNTGTGTSSGLFSQQNNAFSANKPTSFGSFGTSTSSGGLFGSTNTASNPFGGANS
LFGGSGFSATQQPGTTVKFNPPTGSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRL
EDYQAGRKGPTNQMAAPTGSLFSSTAATSSATTGLFGSTAPNTSFSFGQTKSTFGAAAPS
GFGATTGGLFTQPTQQPAGSLFKPFGQTTTAPNTGFSFGNTNTMGQANTSTMGLFGNTAA
SQSGGLFGTAQTSTATGFGAGTGLFGPTNTGFGNVGTQQTLFGNKTAGFGTTTTSAPSFG
TGTGLFGNKPALTLGTGTNTSTFGFGANPAAGSLFGNKPATGGLGTGLGTSFGAAVGPGQ
TSLFGNNQNKLGTTLGTMGTFGTTGFNSGTSAMGFGAPQQPVALTDPSAAAAQQAMLQQQ
LSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKA
LSSSGSSKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLNSSQYSSQAETETDDLASP
PEYPQNGHSLMEEEEELRELGGSSIQADDDPEVTQFYVNPIAKPIPQGRAQTSLQDTISD
LNMHKAARNGLELSSDDVLASLGEESLQEEREEEQQEIQQSPHPAGIVLNRVGYYTIPSM
KDLAEMTDEHGECSVENFTIGRKGYGSIFFPGEVNVSGLNLDEIVHFRRKEVIVYPDDKN
KPPEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPERLSDMNYEGRLEKASRKQGARFLEYR
TETGSWVFEVAHFSKYGLQDSDEEDDVPLKTDPKKLKTMMPLPPSKLQQPLPPSQHQVAP
QAQSTVVDLPSGLAELDSDMADITQSFPTESLLGGQEDSDLPGETDTTCGKLGGLTSAEL
DGISASSHIASTLGINPHTLQIMKASLFAEDEEDSELFPDRGVMKVSTDVSSPRIVLPGA
QTRTSVGGLLQARFTSGLLSQLSDSPQPLLSRASLTLGDTPRSLHWAAQGPSFLLPPQTP
EPSIRTVGVRRLGGPVPLKESVTLGKGGLLMDVGLFKGRSFRVGWGPGWTLAHCGDRLSS
SGSKHLDHKDLSSKTDFSFLPKPARNKPLVESPYKVTLEQLVGLEPQVPKTSEEEDEESP
TVLQRPLEICLEHSTISTTDSSTCPLVQPQTGVAALHEYAKWIRELNDTRGDADPLLGHW
AEVWTLCEALWGRLGPADQEPDIETPSDYEQQLERRRTFSAWLSRSATCRVEEEVALAGK
GRHTEAIFSYLTGNRISEACRVAQKEGDHRLSLLLSQALGSQYCRDLLALQLADWNRMQT
DCYLPEERLRIFTLLAGKPVWQSSDSVVNVCSQLDWKRCMAVHLWFMLPPTASMADALAK
YEAAFQGSCEGGKYACAPLPPYLEGEKTDVEEEEEKKMDVDEEEESKRPLYDLCFHLLKL
YSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGVLQSLHYSHLSASRQGLLHASYAAQLES
AGLWHMSVFILLHIPDHAQRERAVREMLTLHCPLQETDESVRRERFLTERLLIPERWIHE
AKATRAHRDANRHQEALHLYRAGYWNQCHRLLIQHLASDCIINDNHDYLLEFLEGLAVPE
HSTTIQDWDTAGRVYLDYIRVIKTLQ
NT seq
5120 nt
NT seq
+upstream
nt +downstream
nt
acacaggctttggggcgacaggaggatttggggcttctacgttcggggcgactaccaaca
ctggaggactgtttggtgccacacagaataaacctggcggtctgtttggatccagtacgt
tcagtcaaccagcaacttcctccaccagcaccggcttcggcttcggtgcagcgagcggca
cgtctaccagcttgtttggcaacacaggaacaggcaccagcagtggactcttctcccagc
agaataatgccttcagtgccaacaaacccacatcttttggaagctttgggacgagcacca
gcagcggtgggctcttcggctccaccaacactgcctcaaaccctttcggtggagcgaact
ctctgttcggaggctctgggttctccgcaacacagcagccgggaacaaccgtgaaattca
atcctccaacaggaagcgacacgatggtgaaagctggtgtgaccacgagcatcaacacca
aacaccagtgcatcacagccatgaaggagtacgagaacaaatccctggaggagttgagac
tggaggattaccaggccggcaggaaaggaccgaccaatcagatggctgcaccgacaggca
gcttgttcagttcgactgcggccacatccagtgccaccactggcctgtttggctccacag
cccctaacaccagcttctccttcggacagactaaaagcaccttcggagcagcagcaccca
gcgggtttggtgcaaccacaggcggccttttcactcagccgacacagcaaccagccggca
gcctcttcaagccgttcggtcagacgaccaccgcgccaaacaccggcttctccttcggga
acaccaacaccatgggacaggccaacaccagcaccatgggtttgtttgggaacacggcag
cgtctcagtcgggtgggttgttcggcaccgctcagaccagcaccgccacaggcttcgggg
ctggcactgggctgtttggaccaaccaacactgggttcggaaacgttggcacacagcaga
ctttattcggtaataagacggccgggtttggcaccaccaccactagtgctccgtccttcg
gcaccggcactggactctttgggaacaagccggcgctcacgcttggaaccggaaccaaca
cctctaccttcggtttcggagcgaatcctgctgcagggagtctgttcggaaacaaaccgg
ccactggtggactgggcaccggactgggaaccagctttggagcagcagtggggccaggac
agacgtctctgttcggaaacaaccagaacaaactgggaaccactcttggaaccatgggaa
cattcggaacgacaggattcaacagtggaaccagtgcgatgggattcggagctccgcagc
aaccagtcgcgctgactgatccaagcgcagcagcggcccagcaggccatgctgcagcagc
agctcagcgttctggcgtattcgccgtacggagactcgccgctgttcagaaacccactgt
ccgacccgaagaagaaagaggagcgtctgaaaccaaccaatcccactgcccagaaggctc
tgaccacgcccacccactacaagctgactcctcgtcctgcgaccagggttcgccccaaag
cgctgtcgtcatccggctcctccaagtcgcaactcttcgacggcctcgatgatgacgagc
cctcgctcaccaacggagccttcgtgcccaggaagagcataaagaaacttgtgttgaaga
acctgaacagcagtcagtacagcagccaggcggagacggagacagacgacctcgcttcac
ccccggagtatccacagaacggacacagcctcatggaagaggaggaggagctgagggagc
ttgggggctctagcatccaggcagacgatgacccagaggtcacccagttctacgttaacc
ccatcgccaagcccatcccacagggtcgcgcccagaccagcctgcaagacaccatcagtg
acctgaacatgcacaaagcggcgaggaacggcctggagctgagcagtgatgacgtgctgg
catctctgggggaggagtctctgcaggaggaaagggaggaagagcagcaagaaatacaac
agtcccctcatccagcaggcatcgtcctcaaccgtgtgggttattacaccatcccctcca
tgaaggatctggctgagatgacggatgaacacggagagtgttcggtggaaaactttacta
tcggcaggaaaggttatggctccatcttcttcccgggcgaggtgaatgtgagtgggctga
accttgacgagatcgtccacttccgacgcaaggaggtcattgtgtacccggatgacaaaa
acaagccgcctgagggggaggggcttaacagacgggcagaggtgaccctggacggcgttt
ggccaaatgacaagacgacctgcactcagatcaggagccctgagcgtctatccgacatga
actacgagggtcggctggagaaagcctcgcgcaaacagggagcacgtttcctggagtaca
gaactgagacggggtcctgggtgttcgaggtggcccacttctcgaagtacggcctccagg
attctgacgaggaggacgacgtacctctgaaaaccgaccccaagaagttgaagaccatga
tgccacttcctccctccaagctgcaacagccgcttcccccctcccaacatcaggtggcgc
cacaggctcagtccactgtcgtggatcttcccagtggcttggcggagctggacagtgaca
tggccgacatcacccagagtttcccgacagagagcctgctgggagggcaggaggacagcg
acctgcccggggagacagacacgacatgcgggaagctcggaggtttgacctctgctgagc
ttgatggaatctctgcgtccagccacatcgcatcgacgctgggcatcaacccgcacacgc
tccagatcatgaaggcgtctctgtttgccgaggatgaggaggacagtgagttgttcccgg
accgtggagtgatgaaagtttccactgacgtctcgtcccctcgcatcgttctgccgggag
ctcagacccgaacctctgtgggtggtcttcttcaggctcgttttacctccggcctcctct
ctcagctctcagactctcctcagcctcttctgtccagggcgtccctgacgttgggcgaca
ccccccgctcattacactgggcagcacagggcccctccttcctattgccccctcaaactc
cagagccgtcgatcaggacggttggcgtgcggcgcctgggtggccctgtccctctcaaag
agtcggtcactttggggaagggaggtttgctgatggacgtcgggctgtttaagggtcgat
cctttcgtgtcggttggggtcctggctggacgctggcgcactgtggagaccggctcagct
cgtcgggctctaaacacctcgaccacaaagacctgagctccaagaccgacttcagcttcc
tgccaaaacctgccaggaacaaaccacttgtggaaagcccctacaaagttacgctggagc
agctggtcggtctggagcctcaggtgccgaagaccagtgaggaagaggatgaagagagcc
cgacagtgctgcagcgccccctggagatctgcctggagcacagcaccatcagcaccacgg
actcgtccacctgccctctggtgcaacctcagactggtgtggcagcgctgcacgaatacg
ccaagtggatcagggagctgaacgacacgcgtggtgacgcagaccctctcctgggccact
gggccgaggtctggaccctgtgtgaggctctatggggccggttgggccccgccgaccaag
agccagacatcgagacgccaagcgactatgagcagcagctggagagacggcggacattct
ctgcctggctgtcccgtagcgccacctgcagggtggaggaggaggtggctctggcaggga
agggtcgccacacggaggccatcttcagctacctgacggggaaccgcatcagtgaggcgt
gtcgagtcgcacagaaggaaggtgaccatcggttgtccctgctgctgtctcaggccctgg
gctctcagtactgtcgtgatctgctggctcttcagctcgccgactggaaccgcatgcaga
ccgactgctacctaccagaggaacgacttcgcatcttcacactactggcagggaaacctg
tgtggcagtcgtcggactccgtggtgaacgtttgctcacagttagactggaaacgctgca
tggctgtccacctctggttcatgcttcctccgactgcctccatggctgatgccctcgcta
aatatgaagctgccttccagggctcatgtgagggggggaagtacgcctgtgcccccctgc
ctccgtatctggagggggagaagacagacgtggaagaggaggaggagaagaagatggacg
tggacgaggaggaggagtctaaacgacctctgtacgacctctgtttccacctgctcaaac
tctacagtgacagacactacagtctgcagcagctgctggatcctctcaccgtcacctggg
agcgtctggattaccgtctgagctggcacctgtggggcgtcctgcagtcgctgcactaca
gccacctgagcgcctcacgccagggactcctccacgccagctatgccgcacaactggaga
gcgccggcctctggcacatgtccgtcttcatcctactgcacatccccgaccacgctcagc
gggaacgagccgtcagagagatgttgaccctccactgccccctgcaggagactgacgagt
ctgtccggagggagcgcttcttgacggagagactgctcatcccagaacggtggatccacg
aggccaaggccacgcgagcacaccgagacgcaaacagacaccaggaggcgctgcatctgt
accgggccggatactggaaccagtgtcaccggctgctgatccaacatctggcttcagatt
gcatcatcaacgacaaccacgactacctgctggagttcctggaggggctggcggtccctg
aacacagcaccaccatccaggactgggacactgcagggagggtttacctggactacatca
gagtcattaagactctgcag
DBGET
integrated database retrieval system
