Paralichthys olivaceus (Japanese flounder): 109645374
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Entry
109645374 CDS
T06037
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109645374 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pov03009
]
109645374 (utp18)
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
109645374 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
Beta-prop_TEP1_C
Beta-prop_NOL10_N
B-prop_COPA_B_2nd
WD40_like
PROPPIN
KNTC1_N
Beta-prop_Vps41
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
109645374
NCBI-ProteinID:
XP_019966522
LinkDB
All DBs
Position
Unknown
AA seq
523 aa
AA seq
DB search
MEDVIPLPEPSGARKRGRAKKRDPRQEEEKRRRNVNSVSGLREEDASVRVLEELLFGAED
ELRGRILEEDEEATERLEDEDVESEEDEDEAHLQRQPTREAAWVDEDDELEEEVDMKHRY
RKDLMKGDAESIMTKHKLQQRMREQFQKSMGGAPSWAESSSRKKKMKMNAEDDEDNDDEE
EDDLLRRTGNFVASSERLPSGILRMKKCLPANSARPSEDRLTTVQFHPSAQVIMTAGLDQ
SVSLFQVDGKTNPKIQSIHLERFPVHRAQFSTDGETVIATGVRNKMFYLYDMMEGRVTPV
HTVRGLNENRVKEFSVCPEGGALLLTGTRGYLHLLTLKTKEVVCSMKINGDVSGVAFSHN
GSKVFVNSEEGEVYVWDVRSSRCLNKFTDDGCVKGTSIAASRNGQYLACGSQSGVVNVYS
QEACLNSANPKPLKAVMNLLTSATSLTFNPTSEILAIASRAEDEAVKLVHLSSLSIFSNF
PVSKRNIVYRASCLDFSPHSGFFSLANNKGHAPLFRLLHYKDF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgtgatcccgctgccggagccgagcggagcgaggaagagaggccgagcgaag
aagagggacccgaggcaggaggaggagaagcggcggaggaacgtgaacagcgtgtcgggg
ctgcgggaggaggacgcctcggtgcgggtcctggaggagctgctgttcggggcagaggac
gagctgcggggccgaatcctggaggaggacgaagaggcgactgaacgtctggaggacgaa
gatgttgagtctgaggaggacgaggacgaggctcatctgcagcgccaaccaaccagagag
gccgcctgggtggacgaagatgacgagctggaggaagaggtggacatgaagcatcgttac
cgtaaagacctgatgaaaggagacgctgagtcgatcatgaccaaacacaaacttcagcag
aggatgagggagcagtttcagaaatcgatgggcggagctccgtcatgggctgagagcagc
agcaggaagaagaagatgaagatgaacgctgaggatgatgaagacaatgatgatgaagag
gaggatgacctgctgaggaggacaggaaactttgtggcgtcttcagagcgtttgcccagc
ggcattctgagaatgaagaagtgtcttcctgccaacagcgctcgtccatctgaggacaga
ctgaccaccgtccagttccacccctccgctcaggtcatcatgacagctggcctcgaccaa
tcagtgtccctctttcaggtggatgggaaaacaaacccaaagatccagagcatccacctg
gagcgtttccccgtccacagagcgcagttcagtacggacggggagacggtgatcgccacc
ggtgtgaggaacaagatgttctacttgtacgacatgatggagggccgggtcacacctgtc
cacactgtcagaggtctgaatgaaaacagagtgaaggagttctcagtttgtcctgaagga
ggcgctctgctgctcactgggactcgtgggtacctgcacctcctcacactcaagactaag
gaggtagtttgcagtatgaagattaacggtgatgtcagcggcgtcgccttctcccacaac
ggcagcaaagtcttcgtcaactcagaggagggggaggtgtatgtgtgggatgtgcgcagc
agtcgttgtctgaacaagttcacagatgacggctgtgtgaaggggacgtccattgctgca
tctcgtaacgggcagtacctggcctgtggctctcagtctggcgtggtcaacgtctattct
caggaggcgtgtcttaactcagccaatccaaagcctctgaaggcggtgatgaacctgttg
acctcagcgacctccctaaccttcaaccccacctctgagattctggccatcgcctcccga
gccgaggacgaggccgtaaagctggtccacctgtccagcctcagcatcttctctaacttc
cccgtctccaagaggaacattgtttatcgagcaagctgcctggacttctccccacatagt
ggcttcttctcattggctaacaacaaaggacacgcccccctcttccggttgttgcattac
aaagacttctga
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