Paralichthys olivaceus (Japanese flounder): 109645484
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Entry
109645484 CDS
T06037
Name
(RefSeq) scavenger receptor class F member 1-like
KO
K24318
scavenger receptor class F member 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109645484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109645484
Membrane trafficking [BR:
pov04131
]
Endocytosis
Phagocytosis
Scavenger receptors
109645484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
109645484
NCBI-ProteinID:
XP_019966655
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
SGCPPEFWASDCRQVCRCHPHGRCNPVTGECTCNPNRWGPLCQYPCKCTRRGHCHPVHGN
CTCDEGWWTQTCSKPCQCVSNGSVGPGCDQLTGRCQCRRGHWGLKCPVTCNCYLSMCNER
TGVCECEAGWWGPSCDRRCKCDLTHGSCDPSNGECLCHLGYQGATCNQPCESGKYGSGCK
MSCGYCKDNQLCSATDGACAACEPGWNGTQCDRPCPSGFYGDGCQEKCPRCRNNEPCDPK
TGNCWRCDHGWTGSRCEEACPDRTFGDSCSFLCSPCIHGNCHHVTGRCVCQPGFQGESCN
SSCSDLQFGLNCSSVCDCAEGVRCHPVTGVCPNSGRSAVLAGVLVPLLLLLLAVLCCCLC
CGGGPVDSKDRAAVAEGGLSVRMKYHVYSVLANISAALPCISSWSSGLPRVTVSHHDPEL
TFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCVPPREDIPAVAGGEFHEMSSKCNMFLD
PSGFSSEDITSPFNIPRTSSIAKSKRPSVSFAEGTRFSPKERRGSAQDPGALPRNKPKST
WGVLMLSALQSQGGAARPGDEDAAEGEDKEEEVDEQATDNQESSCEAWDQEVDKTPSRAT
SQVPSSAGRRRTMSNTAAHKGNLPQTSGCDAQAGVLNKVTTVYVTVGKAGRPVSETSSEG
PVQAMLRRLGSLQRQREQESGKSKSKGVEGITKPPRRKLGDRASVWERGEPPGGEVAICK
PIRRKHASHNSSDSVARSDVSQSESGTPKRPLSSILKSVPELAACDPGPVLRAEDEGSSS
GKTESNYLTVGPSGDAASLTEVITNEGAVVSVNDEPCYENVMINHL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
tcaggctgtcctcctgagttctgggcgtcagactgtcgccaggtgtgtcggtgccatcca
cacggccgatgtaaccccgtcacaggtgaatgcacctgcaacccaaaccgctggggtcca
ctgtgccagtacccctgcaaatgcacccgccgtggccactgccaccccgtccatgggaac
tgcacctgcgacgaaggctggtggacgcaaacctgctccaaaccgtgccagtgcgtcagc
aacggctctgtgggtcccgggtgcgaccagctaacaggccgctgtcagtgccggagagga
cactgggggctgaaatgtcccgtcacctgcaactgctacctgtcgatgtgtaatgagaga
actggtgtgtgtgagtgtgaggcaggctggtggggacccagctgtgaccggcgatgtaag
tgtgacctcacacacggcagctgtgaccctagtaacggggagtgcctgtgccacctgggg
taccagggtgccacctgtaaccagccctgtgaatctggaaagtatggcagtgggtgtaaa
atgagctgtggttactgtaaggacaaccagctctgctctgccactgacggggcctgcgcc
gcctgtgaacccggctggaacggtacacagtgcgaccgcccgtgcccgtctggtttttac
ggtgacggctgccaggagaagtgtccacgttgcaggaacaacgaaccatgtgacccaaag
acaggaaattgttggaggtgtgaccacggatggacaggatccaggtgtgaggaggcctgc
cctgacaggacgttcggagactcctgcagcttcctgtgcagcccttgtatccatggtaac
tgccatcacgtgacaggaagatgtgtctgtcagccaggctttcagggagagagctgtaac
agcagctgctctgatctgcagttcggcctcaactgctcctctgtgtgtgactgtgctgag
ggggtccgctgccacccagtcactggagtctgccccaacagtggcaggagtgctgtacta
gcaggagtgttggtccctttgctcctgttgctgttagctgtgctctgctgttgtttgtgt
tgtggaggaggccctgttgacagcaaagacagggcggctgtggctgaagggggtttgtct
gttcggatgaaatatcatgtctacagcgtcctggcaaacatcagtgctgctctgccatgt
atctctagctggtcctctggtctgcctcgtgtcaccgtatctcaccatgacccagagctg
accttcaaccacagcttcattgagcctccatcctctggctgggtgacggaggggtcgtcc
tttgacagtgatgaggaggagggtgaagctctctactgtgtgcctccaagagaagacatc
ccagccgtggcaggcggcgagttccatgagatgagctcaaagtgtaacatgttcctggac
ccatcaggcttcagcagcgaggacatcacctcacccttcaacatccctcgcacctccagc
atcgccaagtcaaagcggccatctgtctctttcgcagagggcacccgcttcagccccaag
gagcggcgtggctccgctcaagaccctggcgctctccctcgcaacaaacccaaatccacc
tggggggttttgatgctctctgcccttcaaagtcagggaggtgctgctagacctggggat
gaggatgcagcagagggtgaggacaaggaagaggaagtggatgagcaggctacagacaac
caggagtcaagctgtgaggcatgggaccaggaagtagacaaaaccccatcccgagccacc
tcacaggtcccaagctcagcaggaagaagacggaccatgtccaacacagctgcacataaa
gggaacctgccgcaaacatctggctgtgatgctcaggccggggttttaaataaagtcacc
acagtgtatgtgacagtgggtaaagcagggagacccgtctcagagacaagctcggaaggc
cccgttcaagccatgctgcgaagactcggcagccttcagagacaaagagagcaggagtct
ggcaagtccaaatccaagggagtcgaggggatcaccaaaccacccagacggaagcttgga
gatagggcgagtgtgtgggagcggggagagccacctggaggggaggtcgccatttgtaaa
cctataagacggaagcatgcttcccacaactcctctgacagtgtggcccgtagtgatgtt
tcccaatcagagagtggcacccccaaacgaccgctgtcctccattttgaaaagcgtgcca
gagctggctgcatgcgacccggggccagttctgagggctgaggatgagggctccagttca
ggaaagaccgagagcaactacctgactgtaggaccgtcaggagacgctgcgagtctcaca
gaggtcatcaccaacgaaggagcagtggtcagtgtgaatgatgaaccttgctatgaaaat
gtcatgattaaccacttgtga
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