Paralichthys olivaceus (Japanese flounder): 109645732
Help
Entry
109645732 CDS
T06037
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109645732 (casc3)
03015 mRNA surveillance pathway
109645732 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109645732 (casc3)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109645732 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109645732
NCBI-ProteinID:
XP_019966925
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSASPTLKSRAKEPEPAEAPAVRPEAKSEVES
ECESEDGVGEAVLSDYESADPEDNGSHSEGVEEEEEAEQYSDEDTPAAASESEPAAPSGP
AAGEEGERVEVNEEEEEEVEEQEPEREEPESEGGGQSKEESKAEEKENLTGERQSGDGQE
STDDPETKAGGKPGQKLDDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKD
EGRWEHDKFREEEQAPKSREELIAIYGYDIRNGGGPGDRSYRQRRPRQSVSPSRDKRWRE
GGGGERSVRSWHGGGGGLNRGVPPPSSIHTSSTSSSSLPLSSAQRSNNPSRPPPSRSRPS
HQSQMHLPPQSHYRNDESNAPQMHPRERQGPKAHSELAGDRGVASRGGRGSGGRGGPSVV
VENSCSSQPGVEEKDLSSSAVKTVALSQPGGYQSASPRRQQKEQRGSADRSVSGLASSSS
TSDPSLQSSSAANRESSPPTERPVERKSYLLARRTRSRPTDLGSKQPSVEETAGGNASSP
GSVGGRSWTGAGDSPSQTGGGGGGGAGGLTELDQDVARLSLAGQTWNQSPTSYIRSEMRG
LPSPLHIPGGPPQFSSIEEMGVGSSRAKRYSSQRQRPVPEPAPPMHLGVMDGHYYEPMSY
QGPIYAHGDGPAPIPPQGMLVQPEMHIPHPGLHPHQSGAPIANPTLYAGPPVSLSPGQPQ
QLLPPPFYPPPGVMTFPYPTMYPTPQGQAQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPV
TVKPPPPEVPFASE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgacggaggcggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcggcgtccccgaccttgaagagccgggcgaaa
gagcccgagccggcggaggccccagcggttcgacccgaggcgaagagcgaagtggagtcc
gaatgtgagagtgaagatggagtgggagaagctgtcctgtctgactacgaaagtgcagac
cccgaggacaacggctcccattcagagggtgtggaggaggaagaggaggccgagcagtac
agcgacgaagacaccccggcagcagccagtgagtcggagcctgcagctcccagcggcccg
gcagcgggagaggagggcgagcgggtagaggtcaatgaggaggaggaggaggaggtggag
gaacaggagccagagagggaggagccagagagcgagggaggggggcagagcaaagaggag
agcaaagcagaggagaaggaaaatctcactggagagagacagagcggagatggacaggag
tccacagacgacccagagacgaaggcgggaggaaaaccgggtcaaaagctcgacgatgac
gaggacagaaaaaacccggcctacatccctaggaagggactgttcttcgagcatgacgtc
agaggtcacgctcaggaggaggagagacctaaaggtcggaacaggaagctgtggaaagac
gagggtcgctgggagcacgacaagttcagggaggaggagcaggcgccaaagagccgcgag
gagctcatcgccatctatggttatgacatcagaaacggcggcggcccaggagaccgctcg
tacagacagcgcagaccaagacagagcgtgtctcccagcagagacaagcggtggagagag
ggaggaggaggagagcgatcagtccgatcctggcatggaggaggtggaggtctaaaccga
ggagttcctccaccttcatccatccacacatcctctacatcatcttcctccctccctctc
tcgtccgctcagcgcagcaacaacccctccagaccgccaccctcccgcagcagaccatcg
caccagagtcagatgcacctcccacctcaatcccactacaggaatgatgaatcaaacgca
ccccaaatgcatcccagagagcgacagggccctaaagcacattcggagcttgcaggcgac
aggggtgtggccagcagaggagggcgtggcagcggaggaagggggggtccctctgtggtc
gttgagaacagctgcagcagccaaccaggtgttgaggaaaaggacctgagctccagcgct
gtaaagacagtggcgttgtcacagccgggcggttatcagtctgcttcacccagacgacag
cagaaggaacaacgaggcagcgccgaccgctctgtgtctggattggcttcttcctcctcc
acatctgacccctcccttcaatcatcatcagcagccaatcgggaatcctctcctcccacc
gagcggccggtagagcgtaaatcttacttgctggcccgcaggactcgctctcggcccaca
gacctgggaagcaaacagccatccgtggaggagaccgcgggcgggaacgcctcatccccc
ggcagtgtgggagggaggagctggacgggagcaggagacagtcccagtcagacagggggt
ggagggggtggaggggcaggggggctgaccgagctggaccaagacgtggctcgactcagt
ctggccggacagacctggaaccagagtccgacgtcatacatccgctctgagatgagaggc
ctcccgagccccctgcacatccccgggggcccgccgcagttctccagcattgaggagatg
ggcgtcggctctagtcgggccaaacgctactcctcccaacgtcagagacccgtacctgag
ccggctccgcccatgcacctgggagtgatggatggacactactacgaacccatgtcgtac
cagggaccaatctatgctcatggggatggccccgcccccatcccaccacaaggcatgctg
gtccagcctgagatgcacatcccccaccctggtctccacccacaccaatcaggtgccccg
atcgctaaccccaccctctacgcaggcccacctgtgtctttgtcacccgggcaaccacag
caactgctgccacctccgttctatcctccaccgggcgtcatgaccttcccttaccctacc
atgtacccaaccccacagggtcaggcccaggtgacctatggaggtgtgacgtactacgac
acgatgcagcagcaggctcagcccaagccttcacccccccgccgcacgtcccagcccgtc
accgtcaagccccccccaccagaggtgccctttgcctcagagtga
DBGET
integrated database retrieval system
