Paralichthys olivaceus (Japanese flounder): 109645851
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Entry
109645851 CDS
T06037
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pov01009
]
109645851 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109645851 (hdac6)
04131 Membrane trafficking [BR:
pov04131
]
109645851 (hdac6)
03036 Chromosome and associated proteins [BR:
pov03036
]
109645851 (hdac6)
Enzymes [BR:
pov01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109645851 (hdac6)
Protein phosphatases and associated proteins [BR:
pov01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109645851 (hdac6)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109645851 (hdac6)
Membrane trafficking [BR:
pov04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109645851 (hdac6)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109645851 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBR
Motif
Other DBs
NCBI-GeneID:
109645851
NCBI-ProteinID:
XP_019967075
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MKSEPDPPGSGIKSVRRSPRLSPQNEGKETKREGESFKEMKRRGRMERSREEMEDELNSR
LQTLDLSSRSSVSGTGLVYSEIFTHHQNLWEPSHVESPHRVTSIMKELETQELLSHCIRV
EPREATEDELLLAHMKHYVDMIKSTQTMSESELHTLSEKYDSVYLHPRIKKIKRIVLIVD
WDVHHGQGIQYLFQEDPSVLYFSVHRYEQGSFWPHLAESDGGFVGSGRAEGRTMNLAWDK
TGMTDADYITAFQQLLLPVAYEFQPQLVLVSAGFDAAVGDQKGEMCVSPQCFHVLTHLLM
SLAEGRLVLALEGGYNLQSTAEGVAACVRALLGGACPSLTPPTVTSDSALQSISRTVSAQ
YPHWASLQVLEGSSLAEGSVIRAMSDEQSTKQPSSAPSVVTTTGLVYDDRMMEHLNMWDR
HHPEQPQRISKIFSKHQQLGLVKRCQRIPARPATEEELTMCHSMQHVELIKSSSVMKSRD
LHKLGEEFNSIFFNNQSFHSAQLAAGGCFNAVERILRGEVSNGVAIVRPPGHHAERDSPC
GFCFFNTAALAARHAQKISQPAPLRVLILDWDVHHGNGTQHMFEDDNSVLYISLHRYDNG
IFFPSSEDAAPNRVGVAKGAGFNVNVAWSGGRMGDSEYLAAFHHVVMPIATEFNPGLILV
SAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISESMAMCTSM
LLGDPPPSLVTPLPPPHHGAVATINEVIRHHAPYWRSLRINIPELVRASLPPLKHRGKRS
SKGKGRKSEQSGTDRPLLPPAGAKDSAAEQSLHQLTQGLASLDISQTSVSHAPATSTPVG
GARAKVRPSPEVTCEGEVKAESGSLAVCEQNQSADSTLPQTQIVAVPVGDEAAGGAGAEL
EAAGACGWSKPQMCVELTCGGRTEESSLYVVDPLSWCPHLDSVKPLPSSGINIYMPCQDC
GSEAENWICLTCYQVSHHLHSSDPED
NT seq
2959 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgaaccggatcctccaggatctggaatcaagtcagtccgaaggtctcctcgt
ctgtcccctcagaatgaaggaaaggagacaaagagagaaggagagagtttcaaggagatg
aagaggagaggaaggatggagagaagcagagaggagatggaggacgaactaaacagcaga
ctgcagacactggacctgtccagcagatcttcagtcagtggaactggtcttgtttattct
gaaatcttcactcatcatcagaacctgtgggaaccaagtcatgtagagagtccacacaga
gtgacgtccatcatgaaggagctggagacacaagagctgctgtctcactgcatcagagtg
gagcccagagaagctacagaggacgagctgcttcttgctcacatgaaacattatgtggac
atgataaaatcgacccagacgatgtcagagagtgaactacacactctgtctgagaaatac
gactctgtttacctgcatcctagaattaagaagattaagaggatagtgttgatagtggac
tgggacgttcatcatggtcaggggatccagtacctgtttcaggaagaccccagtgtcctg
tacttcagcgtccacaggtacgagcagggatctttctggcctcacctggccgagtcagac
ggggggttcgtgggcagtggacgagccgaaggacgaaccatgaacctggcctgggacaag
acggggatgactgatgctgattacattactgctttccaacaactgctgctgcctgtcgcc
tacgagtttcagcctcagctggttctggtctctgctggatttgatgctgcagtcggagat
cagaagggggagatgtgtgtgagtcctcagtgtttccatgttctgactcacttgttgatg
agtttggctgaaggtcgacttgttcttgctcttgagggaggttataatctgcagtcgaca
gcagagggtgttgcagcctgtgtcagagctctgctgggaggagcctgtccttctttgact
ccgcccactgtcacatctgacagtgccctgcagtcgatctcccggaccgttagtgctcag
tacccacactgggcgagtctgcaggtgctggaaggcagctcattggccgagggcagtgtc
atcagagctatgagcgatgagcagagcacgaagcagcccagctccgccccctctgttgtc
acgacaacaggtctggtttatgatgacaggatgatggagcatctgaacatgtgggacaga
catcacccggagcagccgcagagaatctccaagatcttctccaaacaccagcagctcgga
ttggtcaaacgctgccagcggataccagcgcgcccagcaacagaggaggagctgaccatg
tgtcacagtatgcagcatgtggagctcattaaatcatcgtcagtgatgaagtccagagat
cttcataaacttggagaagagtttaactcgatcttcttcaacaaccagagttttcattct
gctcagcttgcagccggaggctgttttaatgctgtggagagaatcctgagaggagaggtg
agtaacggcgtggcgatcgtgcgacctccgggacatcacgcagagagagactctccatgt
ggcttctgcttcttcaacacagcagcactcgccgctcgtcatgcccagaaaatctcccaa
cctgcaccactgagagtcctcatcctggactgggacgttcaccatggcaacgggacgcaa
cacatgttcgaggacgacaacagtgtcctgtacatctccctccatcgctatgacaacggg
atattctttccatcatcagaggatgccgccccaaatagagtgggtgtggccaaaggggca
gggtttaacgtcaacgtggcgtggagcggaggacggatgggcgactccgaataccttgct
gcttttcaccacgttgtcatgccgatagctaccgagtttaaccctggtctgatcctggtg
tcggccgggttcgatgcagcacggggtgacccgctaggtggatatcatgtgacccctgag
ggatacgcccacctcacacacctgctgatgtcactggccggggggcgggtccttctcata
ctggagggaggttacaacttgtcgtccatctctgagtccatggcgatgtgcaccagcatg
ttgctaggagaccctcctccatccctggtgaccccactcccccctcctcatcacggcgct
gtggcaacaattaacgaggtcatccgacaccacgccccctactggaggtccctgaggata
aacatcccagagttggtgcgggcatctctgccccccctgaagcatcgtgggaaacgtagt
tcgaaaggaaaaggcaggaagtcagagcagagcggcacagacagacccctgctgccccct
gcaggagcgaaggactcagcggcagagcagagtcttcaccagctcactcagggattggcc
agtttggacatcagccaaacttccgtcagtcacgcacctgcaacgtccactccagtgggc
ggggccagggcgaaggtccggcccagcccggaggtcacatgtgagggtgaagtgaaggcg
gagtccggcagtctagccgtatgtgagcagaaccaatcagcagacagcacactgccccag
actcagattgttgctgttcctgtcggagatgaagctgctggaggagctggggcggagctt
gaggcagcaggggcgtgtggttggtcaaagcctcagatgtgtgtggagctgacgtgtgga
ggacgaacagaagaatcatcactatacgtggtcgaccctctctcctggtgtcctcacctg
gactctgttaagcccctcccctcctcaggtataaacatctacatgccgtgtcaggactgt
ggctctgaagctgagaactggatctgtctcacctgctaccaggtctcacatcaccttcac
tcaagtgaccctgaggatc
DBGET
integrated database retrieval system
