Paralichthys olivaceus (Japanese flounder): 109645984
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Entry
109645984 CDS
T06037
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109645984 (taf1c)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
109645984 (taf1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
109645984
NCBI-ProteinID:
XP_019967228
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MEHQFPPQLFPSFYNSGPPESVLRHCAGDWGCYDRVRAECGSGRASNWTFTPRHQVRGET
WRHTEPLPVPLLRPRKTFLWPSKPPDPLDFREHMQNFFMDHSQDAFGYMGEILSENFNFK
EGTRERNQKNSVNMGKMKNVLDMLEFQMCHKSNWSSKLNGFGALLSDVVHSVPPELLGSL
LYEELTEQRERMLFFEGATGGALAFIPFSEGGSSQHGCLLYPGNKGLNRLNFHNVELQHC
RGRSSVLTAGGSDPIRFHLKGPIRQISSASLFNNCCVAVRSDHLCGVWRFGEGNDPRLLQ
VVNTAEVATCVSASPHVLGEVLVASESGAANLWTVGKGMQKVREEDSNLYFNAKSSWRWC
EFSAHPRVMLYADRTGVEFTDIRSSPVSCHTLFRISNTSECRSGERLILSRYLGDVHSFH
HLITTQYSAYVMDERFPCVPMLKWDHMMESPPLFCHVLPGSASSGSVVGGDRTTKVVLGS
YSSQEITMLQYSGGRVEACFSRGPPLALHRPRESLRHLPVQIPHRLDTATNRLSSPAAGL
TCVQKKGGEECLCVVQLTEAGDIFYQILEPDHPDADTSRPPAAETLPRRKDAETPERTPA
EHLAQDAQLVVTDTTSDEDVIGPTQVVPRYVAETPEREQTSDSEDSETEAKSRWRKRLEL
QVIVNDDPEPDHVADLDRGETDGAEAGKEPGGAEETLRSSSSSGRVGPPEQATDVKPSKD
VLVTWKHWLQRLRKKSRGKRPRLHFTTRTDGLLQLPGGDARVSSEDERVQSLRRDLRACM
SNRSLLLHSAVSASLRAPDSVPLPDVVDTEAWTDELSQRLKLSWQSEDAWRAWWEDKLGL
NKEEKVKALRRKRRREKEAKRASGQRRELSGSFTSSVSYQDLGGYSDSAGWSSAASQGGW
SDSEGLMPLSVRGTPGATTPSTVTCETPVPTPTTTPVKGKQGDQQTPSTSCTQRPEATSA
NRRSSKRPAEDDLFTPQVRNFNFLGEEGGVRSPRRTPRVDLSRDDFVWSGFSQSLSQGSQ
GRPGLSQSSQASQKKKKSRMGF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccagttccctccgcagctgttcccctcgttttataacagcggacctccggag
tctgtcctgagacactgcgccggagactggggctgctacgaccgcgtgagagcggagtgc
ggctctggtcgtgcctccaactggacctttacacccagacatcaggtcagaggggaaacg
tggcgtcacactgagcctctaccagttcccctcctgcgtcctagaaagacgttcctgtgg
ccttcaaagcctccagatccactggacttcagagaacatatgcagaacttcttcatggat
cactctcaggacgcatttgggtacatgggagaaattctcagcgaaaacttcaactttaaa
gaaggaacgagagaaagaaatcagaagaactctgtcaacatggggaagatgaagaatgtc
ctcgatatgctggagtttcaaatgtgtcacaagtcgaactggtcctcaaaactgaacggg
ttcggtgcgctgctgtcggacgttgtgcattcggttcctcctgaactgttgggttctctg
ctgtatgaggagctgacggagcagagagaacgtatgctcttctttgaaggagccacaggc
ggcgctctggccttcatccccttctctgagggcggcagctctcagcacggctgcctcctc
taccccggaaacaaagggctgaaccgactgaacttccacaatgtggagctgcagcactgc
agaggacgctcctccgttctgacggccggcggcagcgacccgatccggttccatctgaaa
ggtccgatcagacagatcagctccgcctctctgttcaacaactgttgtgttgccgtgcgg
tcggatcacctgtgcggagtttggaggttcggcgaaggaaacgatcctcgtctgcttcag
gtcgtcaacaccgcagaggtcgcgacctgcgtcagcgccagtcctcatgttttaggtgaa
gtcctggtggcgagtgagagcggagcagcgaacctgtggactgttggcaaagggatgcag
aaggttcgggaggaggattccaatctgtacttcaatgccaagtcgtcgtggcgatggtgc
gaattctccgcccatcccagggtgatgctgtacgcagacaggacgggggtggagttcaca
gacatcaggtcgagtcccgtcagctgtcacaccctgtttcgcatcagcaacacgtcagag
tgtcggagcggagagaggctcatcctgtccagatatctgggagacgtccactccttccac
cacctcatcaccactcagtactcggcctacgtcatggacgagcgtttcccctgcgtgccc
atgctcaagtgggatcacatgatggagtccccgccgttgttctgtcacgtcctccccggc
tccgcctcctctggttcggttgtgggaggggatagaaccaccaaggtcgtgttgggctcg
tacagttcccaggaaatcaccatgctgcagtactcaggaggtcgagtcgaggcctgtttc
agtcgaggtcctcctctggctctgcacagacccagagagagtctgagacacctccccgtc
cagattcctcaccgcctggataccgccaccaacagactgtcctcacctgctgcaggtctg
acgtgtgttcagaagaaaggaggagaggagtgtctctgtgtcgtacagctcacagaggcc
ggagatattttctaccagatcctcgagccggatcatccagacgccgacacgtctcgacct
ccggcagcagagacgctgcctcgacggaaagacgcggagacaccagagagaacaccagca
gaacatctcgcacaggacgcacagctcgttgtaacggacacgacgagtgatgaggacgtg
atcggaccgactcaggttgtgccgaggtacgtggctgaaacaccggagagggagcagacg
tctgactccgaggattcagagacggaagcgaaaagtcgttggcggaagcggttggagctg
caggtgattgtgaatgatgatcctgagccggaccacgtggctgatttggacagaggagag
acagacggagctgaagccggtaaagaacccggcggagcggaggaaacgctccgcagctcc
agcagctcaggtcgcgtcggtccccccgagcaggcgactgacgtgaagcccagcaaagac
gttctcgtcacctggaaacactggctccagagactgaggaagaagagccgtgggaagagg
ccccgcctacatttcacaaccagaactgacggtcttctccagctgcccggtggcgacgcg
agagtttcttcagaggacgagcgcgtgcagagcctgaggcgagatctgagagcgtgcatg
tccaaccgctcgctgctgcttcacagcgctgtgtccgcctccctcagagctccagactct
gtgccgctgccagacgtggtggacacggaggcctggacagatgagctcagccagcgcctc
aagctctcctggcagagtgaggacgcgtggcgggcgtggtgggaggacaagctggggctg
aacaaggaggagaaggtgaaggctctgaggaggaagaggaggagggagaaggaggcgaag
cgagcctccggccaacgccgggagctgtcggggagcttcacctcatccgtcagctaccag
gacctgggcggttactccgattcagctggctggtcctctgcggcgagccagggggggtgg
tctgacagcgaaggcttgatgccactgtctgtgcgcgggacgccgggagccaccacaccc
tccaccgtgacgtgtgaaaccccagttcccacgccaaccaccacacctgtgaaaggtaaa
caaggcgaccagcagactcccagcacctcctgcacccagaggccggaggccacatcggcc
aatcgcaggagcagcaaacgtccagcagaggacgatctgtttacaccacaggtgagaaac
tttaacttcctgggggaggagggcggcgtgcgatcccctcggaggacgccacgggtggat
ctgtccagggacgacttcgtgtggtcgggtttctcccagtcgctctcccagggttcacag
ggtcgaccggggctgtcgcagtcatcgcaggcgtctcagaagaagaagaagtcacgaatg
ggattttga
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integrated database retrieval system
