Paralichthys olivaceus (Japanese flounder): 109645987
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Entry
109645987 CDS
T06037
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109645987 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109645987 (taf5l)
03036 Chromosome and associated proteins [BR:
pov03036
]
109645987 (taf5l)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
109645987 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
109645987 (taf5l)
Chromosome and associated proteins [BR:
pov03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
109645987 (taf5l)
STAGA complex
109645987 (taf5l)
TFTC complex
109645987 (taf5l)
SAGA complex
109645987 (taf5l)
SLIK complex
109645987 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
TFIID_NTD2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_HPS5
RMC1_N
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
PROPPIN
WD40_like
PEP5_VPS11_N
Nbas_N
WD_LRWD1
Beta-prop_IP5PC_F
Beta-prop_ELP1_1st
Lysis_col
AAA_3
Motif
Other DBs
NCBI-GeneID:
109645987
NCBI-ProteinID:
XP_019967231
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MCDGGRGRTEEHDDGAAGSSVASAGAREESKRLHPVHTTRGRSSTQRYAVMKRVRTEQIQ
YAVAQYLKRRQYVDTDGSMKGAKLFQSPEEMAASLTVQTESGCANIVSAAPCQADPQQYE
TQYSRLRSFLSETEIPWAKEVSSILYPLFVYLHLDMVRCGLKGAVDGFYSRFHGAFLQDS
EQRATIEQLRHVLTAQDVAANPKLSVFLEHKYVVHLTEPAYSYLLRYLQSEDNSALCRAL
NTHLQVEVSASRRTDYQLYGAASGATAAPNSTSSWAGVDGAEGGDGVEVPAGIPQSEVAL
EALQDCIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDSSTVKLWSLRA
RKLKAKPHQADVSRIHLACDVLEEEVDEEDVCGSEIKTLRGHSGPVFRTCFLTDSSGLLS
CSEDTTVRYWDLGSFTNTAVYQGHAYPVWDVDVSPCSLYFATGSHDRTARLWTFSRTYSL
RLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSLAFSPN
GKYLASAGEDQRVRLWDLSSGTLFKDLRGHTDSVTSLSFSPDSSLVASSSMDNSVRVWDI
RNSHGGTPADGSSSELVGLYTGNTSNVLKVQFMACNLLLVTGTAQEKAEQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatggcgggagggggcggaccgaggagcacgatgatggagcggcgggcagcagc
gtagcttcagccggagcccgagaggaatccaagcgtctccacccagttcacacgacccga
ggacggagcagcacccaacgatatgcagtcatgaagcgggttcgcactgagcagatccag
tatgcagtggctcagtacctgaagaggagacagtatgtggacaccgacggctccatgaaa
ggagccaaactctttcagtcgcctgaggagatggccgccagcctcacagtgcagacagag
tcgggctgtgccaacatcgtctccgctgcgccctgccaggctgacccgcagcagtatgag
actcagtactcacggctgcgctccttcctgtcagaaacagaaataccctgggcgaaggag
gtgagcagcatcctctacccgctatttgtctacctccacctggatatggtgcgctgtggc
ctgaagggggcagtagatggtttttacagtcgtttccatggcgcctttcttcaggacagt
gaacaacgagccaccatagagcagctccgccatgttctcactgctcaggatgttgcagcc
aatcccaagctgagtgtcttcctggagcacaaatacgtggttcacctgacggagccggcc
tacagctacctgctgcgctacctgcagagcgaggacaacagcgccctctgcagggccctg
aacacacatctgcaggtggaggtctccgcctccaggcgtacagactaccagctgtacgga
gccgccagtggcgcgactgccgccccaaactccacctcctcctgggcgggggttgatggg
gcagagggtggggacggcgtcgaggtccctgctgggatcccacagagcgaggtggccctg
gaggctctgcaggactgcatcaagaaagtccgcgagggccccccctcgctcaccactgtg
tgtttttacgccttccaccacacggagcagatgctgaacactgccgaggtgtcggctgac
agccggctgctcgccgctggcttcgacagctccacggtgaagctgtggagcctccgagcc
agaaagctgaaggccaaaccacatcaggctgacgtgtcgcgcatccacctggcctgtgac
gtcctggaggaggaggtggacgaggaggacgtctgtggtagtgagataaagacgctgcga
ggtcacagtggaccagtgttccgtacctgcttcctgacggacagctccggcctgttgtcc
tgctccgaggacacaaccgtccgttactgggacttgggcagcttcaccaacacggcggtg
taccagggccacgcctacccggtgtgggacgtggacgtcagcccctgcagcctctacttt
gccactggctcccatgaccgcactgcccgcctctggacattctcccggacgtattcgcta
cggctctacgccggccatctcgccgacgtcgactgtgtcaaattccaccccaactccaac
tacctggccaccggctccacagataagactgtcaggctgtggagcacccagcagggggcg
tctgttcgcctcttcaccggccaccgcggcccggtgctgtcgctcgctttctcgcctaac
gggaaatatttagcgtctgctggcgaggaccagcgggtgagactgtgggacttgtcgtct
gggacgctgttcaaagacttgcggggacacacggacagcgtcaccagcctgtctttcagc
ccggacagcagcctggtggcgtcctcgtctatggacaactccgtccgggtgtgggatatc
cgtaactcccacggcgggacgccagccgacggctcgtccagcgaactggtgggactgtac
acgggaaacaccagcaatgtgctgaaggtccagttcatggcctgtaacctgctgctggtg
actggaactgcacaagagaaagcagaacagtag
DBGET
integrated database retrieval system
