KEGG   Paralichthys olivaceus (Japanese flounder): 109646077
Entry
109646077         CDS       T06037                                 
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pov03019]
    109646077 (gemin5)
   03041 Spliceosome [BR:pov03041]
    109646077 (gemin5)
Messenger RNA biogenesis [BR:pov03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109646077 (gemin5)
   mRNA cycle factors
    P-body specific factors
     109646077 (gemin5)
Spliceosome [BR:pov03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    109646077 (gemin5)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd DSE1_N EIF3I WDR55 Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR90_POC16_2nd TPR_GEMI5 Beta-prop_RIG_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_Gbeta WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_WDR75_1st PAC11 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C ASA1 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_VPS8 WD_LRWD1 Beta-prop_DCAF4 DNAI3_WD Beta-prop_WDR41 WD40_RFWD3 Beta-prop_ACSF4 NBCH_WD40 PD40 Beta-prop_NUP159_NUP214 Tricorn_2nd
Other DBs
NCBI-GeneID: 109646077
NCBI-ProteinID: XP_019967331
LinkDB
Position
Unknown
AA seq 866 aa
RVEGELVGHRDLVSGFSFCQHAGQSHLCVSSSNDGKICYWDSNSKSLLREHAAHQSPVSA
VHWSPVDKNLVVSGDEKGVVICYWFHTGDTSSFFPEPRTIFCLSCSPHTWNIVAVGYKDG
MIVLIDVSKKGIVMQRLRGHDDEIHSLAWSPLHGEDALYSRPEDSEATNGESAGEEKGCY
LASGSKDQTLRIWSTLKSKGVMTLKLPYLKKRGSAVDPGVKERLWLNVHWPKGRPTQLVS
SCFSGELVLWDLTRSGKQRWTLLGTSSEGQNHSRIVFNMSSVHLQDNRQLLISTSMDRDI
KCWDLDSLDCCWTLPTLGGFVYTLTFSPVGTGCLALGVGDSMIRVWNTLTTQNQYDTRAF
WQGIKSKVTALAWHPKKEGSLSFGTDDGKVGIYEVYSNKPPQISSSYHRKTVYTLAWGPP
VPPMSFGADRGKSTYSLYSCAGEGIILQHDPLKLGGEASDIDKLIRNTNNIKHKLSPHTD
LSWKPDGKVVAIGNEDGCIDVYEAPSLKLLCSIQQHHKIINTLQWHHDHSSPPELHCLLA
SGSSNAIVYVHDLRSIIENPPESPVVVTEPYRRLCGHTDKVTDMAWSPHHEARLVTASYD
GTAQVWDVLQEEALSNYRGHNGYLLSVDWSPVDPDLIWTGGKDFTAQEWRVSKQTFTKPP
KGKKMSKLKEKMKANPKQKRKNKKTSGAGEMNGGPVAEGEKAVTGAEQSGEDEEDEGSSR
SSPVPPAASFEMQRKPSAVPKTKEKPDTNLLKKKKPRSMLPISTSMDHRPKEELLQDCIT
LASVQHDQAPPAGCVPGQGEHIHLGLFSDRPALHRMFQSEEEGHVEAGHFDSVVYLRLWS
GDLEGALQLATERGELNDHLLSIAPM
NT seq 2599 nt   +upstreamnt  +downstreamnt
agagtggagggggaactcgtcggccacagggacctggtgtcgggcttttcattctgtcag
cacgcaggacagagtcacctctgcgtcagctcctccaatgacgggaagatctgttactgg
gactccaacagcaagagtcttttgagggagcacgcagctcatcagagccctgtctcagcg
gtgcactggtccccggtggataagaacctggtggtgtcgggggacgagaagggcgtggtc
atctgttactggttccacacaggagacacttccagcttctttcctgagcccaggaccatc
ttctgcctcagctgctcccctcacacctggaacatcgtggctgtcgggtacaaggacggg
atgatagttctgattgatgtgagtaagaaaggcattgtgatgcagcgtctgcggggacac
gatgatgagatccactcactggcctggtctccgcttcatggggaggacgccctctatagc
agacccgaggacagcgaagcaacaaatggcgagtctgcgggggaggagaaaggctgctat
cttgcctctgggagcaaagaccagactttgaggatctggagcacactgaagagcaaaggt
gtgatgactctgaagctgccgtatctgaagaaaagaggctcagcagtcgaccccggggtc
aaagagagactctggttaaatgtccactggccgaagggacgaccgacacaactggtgtcc
agctgcttcagtggtgagctggtgctgtgggacttgaccaggtcagggaagcagaggtgg
acactgttggggacgtcgtccgagggtcagaaccacagcaggatcgtcttcaacatgagt
tcagttcacctgcaggacaacagacagctgctcatcagcacgtccatggacagagatatt
aaatgctgggacctggactctctggactgctgctggactcttcccaccctgggcgggttc
gtctacaccctcaccttctcccctgtgggtacagggtgtttggcgctgggtgtcggtgac
agcatgatccgggtgtggaacacgctgacgacacagaaccagtacgacaccagggcgttc
tggcagggcatcaagtccaaggttacagcgctggcgtggcacccgaagaaagaaggctct
ttgtcgtttggaaccgatgatggtaaagttggaatctacgaagtctactcaaacaagcct
ccgcagatatcgagctcctatcaccgaaaaacagtctacacattggcttggggaccccca
gttcccccaatgtcatttggtgcagacagaggaaagtcgacctacagcctttacagctgc
gccggcgaaggtatcatcctgcagcacgacccgttgaagctgggcggagaggcgtccgac
atagataagctgatcagaaacaccaataacatcaagcacaagctgtctccgcacaccgac
ctcagctggaagccagatgggaaagtggttgccatcggcaacgaggacgggtgcatcgat
gtttatgaggctcccagtctgaagctgctgtgcagcatccagcagcatcacaagatcatc
aacacgctgcagtggcaccacgaccacagctctccacccgagctgcactgcctcctggcc
tcgggctccagcaacgccatcgtctacgtgcacgatctccgctctatcatcgagaatcct
ccagagagccctgtggttgtgacggagccgtatcgcaggctgtgtggtcacacggataaa
gtcaccgacatggcctggagtccacaccacgaggcgcggctggtcaccgcctcctatgac
ggcacagcccaagtgtgggatgtcctgcaggaggaggcgctctctaactaccggggtcac
aatggttacctgctgtctgtggactggtcgcccgtcgaccccgatttgatctggaccgga
gggaaggacttcacggcgcaggagtggagagtctccaaacaaacgtttacaaagccacct
aaagggaaaaagatgtcgaagctgaaggaaaagatgaaggccaatcccaagcagaagagg
aagaacaagaagacatcaggggccggagagatgaacgggggcccggtggcagaaggagag
aaggctgtgacgggagcggagcagtccggtgaagatgaggaagatgaaggcagctcacgg
agcagtcctgtacctccagcagcttcttttgagatgcaaagaaaaccctctgctgtgccg
aagaccaaagaaaaaccagacacaaacctgctgaagaagaagaagcctcgctccatgctt
cccatcagcacatccatggaccaccgtcccaaagaggagctgctgcaggactgcatcact
ctggcttctgtccaacatgaccaggcgccccctgcaggctgtgtcccaggacagggagag
cacatccatctcggcctcttctctgacagaccggctctgcaccgcatgttccagtcagaa
gaggagggtcacgtggaggcgggtcacttcgactctgtagtgtacctgcgactgtggagc
ggagacctggagggggcgctgcagctcgccacagagagaggagagctgaacgaccacctg
ctctccatcgctccgatgg

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