Paralichthys olivaceus (Japanese flounder): 109646157
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Entry
109646157 CDS
T06037
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109646157 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pov03041
]
109646157 (prpf4)
Spliceosome [BR:
pov03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109646157 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
PRP4
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_Vps41
Ge1_WD40
WD_LRWD1
Beta-prop_WDR19_1st
WD40_like
Beta-prop_WDR11_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
109646157
NCBI-ProteinID:
XP_019967431
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MCKSLFQLEGAPTCIFIVSFCTLLLNRVNDRSVSRCRRRRNKSLISSEERFGTSGSRRRD
AAASFVFTCSSNKGIKKWFKMSDEEDAAPPMKRGRVFYGSLEEKERERLSLEMVSSTTGN
DAVKAGIEAGNINISSGETLEMEERVSERQHEALAEFERRRRARQITVSTDDTEVKAGLR
ALGEPITLFGEGPADRRERLRGVLSVVGPDALKKSRKDEERAKRSQEECQQTWYHEGSAS
LKDARLWLAKYSLPRAVERLEAARAQKDVADATRVMRQQELHKSLRNLNNFCSQIGDDRP
ISFCHFSPDSKMLATGSWSGLCKLWSVPDCNLIRTLRGHNTNVGAIVFRPQAGVSLDQSD
VSLASCAADGSVKLWNLESDEPVADIEGHSERVSRVSWHPSGRFLGTTCYDNSWRLWDLE
VQEEILHQEGHSKGVHDLHFHPDGSLAATGGLDSFGRVWDLRTGRCVVFLEGHLKEIYSL
HFSPNGYHLATGSGDNTCKVWELRNRKCLYTVPAHQNLLSSVRFQPTDGHFLLTGAYDNT
AKVWSHPGWTPLKTLAGHEGKVMGVDVSPDGKLIATCSYDRTFKLWVSE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagtccctgttccagctggagggggcgcccacgtgcattttcattgtttccttc
tgcacattgttgctgaaccgcgtcaatgatcgatcagtgagtcgctgccgtagaagaaga
aacaagagcctcatctcgtctgaagaaaggtttggtacatccgggtcacggcgcagagac
gcagccgcttcgtttgtcttcacttgtagcagcaataaaggaataaagaagtggttcaaa
atgtctgacgaggaggatgcagctccgcccatgaagaggggtcgtgttttctacggaagc
ctggaggagaaagagcgggagcggttgagcttagagatggtgagcagcactactggaaac
gatgcggtgaaggcggggattgaggcaggaaacatcaacatctcatcaggagagacactg
gagatggaagagcgagtcagcgagcggcaacatgaagcgctggctgagtttgagcggcgg
cggcgtgcgcgtcagatcaccgtctccaccgacgacaccgaggtgaaagctgggcttcgg
gctctcggcgagccaatcacattgttcggagagggaccagctgaccgccgggagaggttg
cgtggcgttctctctgttgttggtccagatgccctgaaaaagtccagaaaagatgaagag
cgagcaaaaagatcacaggaagagtgtcagcagacgtggtaccatgaaggctccgcctcc
ctgaaggatgcccggctctggttggccaaatactctttgcctcgggcagtagagcgtctg
gaggctgcgcgagctcagaaggacgtcgccgatgcaacgagggtgatgcgacaacaagag
ctacacaagagtctgaggaatctgaacaacttctgcagtcagatcggtgacgatcgacca
atcagcttctgccatttcagccccgactccaagatgctggccactggctcctggagtggt
ctgtgtaagctgtggtccgtccccgactgcaacctgattcgtacactcagaggacacaac
accaacgtcggcgccatcgtcttccgcccacaggctggagtctctctcgaccaatcagat
gtgagcttggcctcatgtgctgctgatgggtctgtgaagttgtggaacctcgagagtgac
gagcctgtggcggacatcgagggtcacagtgagcgagtgtcccgtgtgtcgtggcatcca
tctggaaggttccttggaacgacgtgttatgataactcgtggcgcctctgggatctggag
gttcaggaggaaattctccatcaggaaggtcacagcaagggagtccacgacctccacttc
caccccgacggctcactggctgctactggaggcctggattccttcggcagggtgtgggac
cttcggactggacgttgtgttgttttcctcgagggtcacctgaaggagatctacagcctg
cacttctctcccaacggatatcacctggcaacaggaagtggtgataacacctgtaaggtt
tgggagctgagaaacaggaagtgcttgtacacagtccccgcccaccagaacctactttct
tcagtccgctttcaacccacagacggccacttcctgttgactggagcatacgacaacaca
gctaaggtttggagtcaccctggttggacgccactgaagacgctcgctggacatgagggg
aaggtgatgggagtcgacgtgtcacctgacgggaaattgatagccacctgttcctatgac
cgcaccttcaaactctgggtatctgagtga
DBGET
integrated database retrieval system
