KEGG   Paralichthys olivaceus (Japanese flounder): 109646500
Entry
109646500         CDS       T06037                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pov03400]
    109646500 (helq)
Enzymes [BR:pov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     109646500 (helq)
DNA repair and recombination proteins [BR:pov03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    109646500 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332 DGKD_4H Glyco_tran_28_C
Other DBs
NCBI-GeneID: 109646500
NCBI-ProteinID: XP_019967804
LinkDB
Position
Unknown
AA seq 1038 aa
MNCGDSDIKIKRVSGRKRSRDGAQSHLTPARKRGGGGGRGGGGPCSQTCSTDRTVHSIMA
EPAELQFCSDAEDLFGDYDSLLGDSSLLAKLDDVEQDERRRELQIVAVDQQDLATLRPSQ
DCIQNQDVLTDSILDVLRDEPFEDIPASQIQFEEQIGEGVKRNRLQDGDKTSTPSRNTGD
GGHRTSEAGTDRLTDKTKRRSRVRRSVTDQLKRTMLCNAAAPSNVSRSVMLKEAVVSEEI
SVALQAMETVSTETTDLGPFFGLPSKVKDLMYKLRGIKSLYDWQETCLNLDCVQQRKNLI
YSLPTSGGKTLVAEILILRELLCRKKDCLFILPYISLVQEKVRGLASFGLELDFMVEEYA
GSKGKFPPVKRRNQTSLYISTIEKGHSLVNSLIESGRLDHLGLVVVDELHMLGDGSRGAV
IEMTLAKVLYMSNKTQIIGMSATLGNIRDLQMFLKAENYTNDFRPVQLKEYVKLNDTIYE
VDAKEEDCFKFSRLLNYKYSSSMQKMDPDHIIALVTEVIPSHSCLVFCPTKKNCENVAGM
ICKYLNDRVFLQCRQEEKGVLLRELKDSGDGSMCPVLRRTVPYGVAYHHSGLTTEERKLV
EEAYSQGVLCLLACTSTLAAGINLPARRVILRSPYVAADFLKRSQYKQMVGRAGRAGIDT
VGESILVLQDKDRDMAKTLVCAPMEKCYSHLMHDDGKGILSLILSLIGLSITTSLQQMRD
FLQGTLLYVQREQLCVERSLWDVVQQCVDLLKEKDLIAVTSHTQTLQVTKLGKATYKGSV
DLSCSDVLYKDLSRGLEGLLLNSYLHLLYLVTPYDMIGQCKPDWRIYFGQFTRLSEAEQK
MSAAVGVPESFIARKAAGQTVKNNVDMMVARRLYLALVLSSLLRETNLWSVADRFQLSRG
FVQTLLSSSSAFCSCVLHFTEELEEFWPFKALLTELTRRLSYCVKAELIPLMEVVGVMES
RAKQLYNAGYKTLTHLANADPASLSKTIENLNKKQANQIVASAKMLLNEKAAALQEEVDD
LLMAPLDLPADLSTEQLV
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgaactgtggagacagtgacatcaaaataaaacgagtttccgggagaaagaggtcgaga
gacggagctcagagtcacctgacacctgccaggaagagaggaggaggaggaggaagagga
ggaggaggaccatgttcacagacatgttccacagacaggacggtccacagcatcatggct
gaacctgctgagttgcagttctgcagcgacgctgaggatctgttcggcgactacgacagt
ctcctgggcgacagctcgctcctggcgaagctcgacgatgtagaacaagacgagagacgg
cgtgagctccagatcgtggctgtggatcagcaggacctcgccactctgcgaccttcccaa
gactgcatccagaatcaagatgtcctcacagactccatcttggacgtcctcagagacgaa
cccttcgaggacatacctgccagccagattcagtttgaagaacagatcggtgaaggtgtg
aagaggaacaggctgcaggacggagataaaacttcaacaccttctagaaacacaggagac
ggtggacacaggacgtctgaggccggcacagacagactcacggataaaaccaagagacgg
agccgagtgaggaggagcgtgacggatcagctgaagaggacgatgctctgtaacgctgcg
gctccgtccaacgtctctcgctctgtcatgttaaaggaagcggtggtttccgaggagatc
agcgtcgctctgcaggccatggagacggtgtccacggagacgaccgacctcgggcctttc
tttggactcccctccaaagtaaaagatctgatgtacaaactgagaggaatcaagagctta
tatgactggcaggagacgtgtctgaacctcgactgtgttcagcagcggaagaatctgatc
tactctcttccaaccagcggaggaaaaactctggtggcagagatcctcatcctcagagag
ctgctgtgcaggaagaaagactgtctgttcatcttaccgtacatttcactggtgcaggag
aaggtacgcgggttagcgagcttcggcctggagctggacttcatggtggaggagtacgcc
ggcagtaaaggcaagtttcctccagtgaagcggagaaaccagacgtcactttacatctcg
acgatagagaaaggccacagcctcgtgaactctctgatagaatccggccggctggatcac
ctcgggctggtggtggtagatgagcttcacatgttgggggatggaagcagaggagctgtc
attgaaatgactctggctaaagttctgtacatgagcaataagactcagattattggaatg
agcgccaccttgggaaacatcagggacctgcagatgtttttaaaagctgaaaattacaca
aatgacttcagacctgtccaactgaaagaatatgtcaaactgaatgacacgatctatgaa
gtggacgcaaaggaggaggactgtttcaagttctcacgtcttctcaactataagtattcc
agctcgatgcagaagatggaccctgatcacatcatcgctctggtgactgaagtcattccc
tcgcactcatgtctggtcttctgtcccacgaagaagaactgtgagaacgtcgcagggatg
atctgtaaatatctgaacgacagggtattcctgcagtgcaggcaggaggagaagggcgtc
ctcctcagggagctgaaggacagcggtgacggctccatgtgtccggtgctcaggaggacg
gtgccttacggcgtggcctaccaccacagcgggctgaccacagaggagaggaagctggtg
gaggaggcctactcccaaggcgtgctctgtctcctcgcctgtacctccaccctcgctgcc
gggatcaacctaccggctcgcagagtgatcctccggtcaccgtacgtggccgctgacttc
ctgaagaggagtcagtacaaacagatggtgggacgagccgggcgagcggggatcgacacg
gtgggagagagcatcctcgtcctgcaggacaaagacagggacatggctaagacactggtg
tgcgctccgatggagaaatgttacagtcacctgatgcacgacgatggaaaaggaatcctg
agtctcatcctgtcgctcatcggactcagtatcaccacctcgctgcagcagatgagggac
ttcctgcaggggacgctgttgtacgttcagcgggagcagctgtgtgtggagcggagtctg
tgggacgtggtgcagcagtgtgtcgacctcctgaaggagaaagatctcatcgccgtgacg
tcacacacacaaacgctgcaggtcaccaagctcggaaaagctacttataaaggctccgtg
gatctgagctgcagtgacgtcctgtacaaagatctgtcccgcggcctggagggtctgctg
ctcaacagttacctgcacctgctctacctggtgacgccctacgacatgatcggccagtgc
aaacccgactggaggatttacttcggacagttcacgcggctgtcagaggccgagcagaag
atgtccgcagccgtcggcgtgccggagagtttcatagcgagaaaagctgccggacagacg
gtgaaaaacaatgtggacatgatggtggcgagacgcttgtatctggctctggtgctgagt
tctctactgagggaaaccaacctgtggagtgtggcggacaggttccagctgagccgaggc
ttcgttcagactctgctcagctcctcgtcggcgttctgctcctgcgtcctgcacttcacg
gaggagctggaggagttttggccgttcaaagcgttgctgacggagctgacgcggaggctg
agttactgtgtgaaggcggagcttatccctctgatggaggtggtcggagtcatggagtcg
cgagcgaagcagctgtacaacgccggctacaagacgctgactcacctggcgaacgccgac
cccgcctctctgtccaagacgatagaaaacctcaacaagaaacaggccaatcagatcgtg
gcctcggctaaaatgctgctgaatgaaaaggcggcggctcttcaggaggaagtggacgac
ctgctgatggcgccgttagatctgcccgctgatttatcaacggagcaacttgtctga

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