KEGG   Paralichthys olivaceus (Japanese flounder): 109646596
Entry
109646596         CDS       T06037                                 
Symbol
rfwd2
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov04115  p53 signaling pathway
pov04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109646596 (rfwd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pov04121]
    109646596 (rfwd2)
Enzymes [BR:pov01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109646596 (rfwd2)
Ubiquitin system [BR:pov04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109646596 (rfwd2)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     109646596 (rfwd2)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_RIG_2nd zf-C3HC4_2 EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 zf-RING_2 Beta-prop_EML zf-RING_UBOX Beta-prop_WDR90_POC16_2nd zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 RING_XB3-XBAT31 WD40_RFWD3 WD40_like Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st zf-rbx1 zf-RING_10 Beta-prop_SPT8 UvrD-helicase zf_C2H2_10 TilS
Other DBs
NCBI-GeneID: 109646596
NCBI-ProteinID: XP_019967916
LinkDB
Position
Unknown
AA seq 712 aa
MSSGRPQQSAGGASSVPSTSSSTTGGSGNTNGGGGSNNAVTSNGNNSGNVVPTRTLAAAG
EGGLSVPTLPAVPSSRGAFASLTRPSASSGSRKKTLHQAPLYNGLLNSYEDKSNDFVCPI
CFEMIEEAHMTKCGHSFCFKCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQ
RSEEKRLKLDHPNGSRWQVFQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQ
ILREFLKEARRNKREQLEQLQKELNFLEEDIKRVEEMSGLYSPMMEAECTVPNVEAPSPA
PSCSSIIEPPDYSQPPGFGGTTQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRI
TDEGRNLNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIA
GVTKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWD
GFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVC
CVKFSPTSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTD
SQLKLWNVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFK
FDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2139 nt   +upstreamnt  +downstreamnt
atgtcaagcggccggccacagcaaagcgctggcggtgcgagctccgtgcccagcaccagc
agcagtaccacagggggcagcgggaacacgaacggtggcggcggcagcaacaacgccgtc
acaagtaatggcaacaactctgggaatgttgtgcccacccggaccctggcagcagccggg
gagggcggcttgtcggtgccaactttgcccgccgtgccttcgtcccggggcgcgtttgcc
tctctgaccagaccctctgcgtcctcgggcagcagaaagaaaaccctccatcaagcacct
ttatacaacggccttctgaattcatacgaggataaaagcaacgactttgtctgtcccatc
tgcttcgaaatgatagaggaggcgcacatgacaaagtgtgggcacagtttctgtttcaag
tgtatccgccagagcctcgaggatagcaacagatgtcccaagtgtaactatattgtggat
aatgtagatcagctttacccaaactttcttgtaaatgaactgatcctcaaacagaagcaa
aggtcagaagaaaagagactaaaattagatcatcctaatgggtctaggtggcaggtcttt
caggatgtgttgagtcctgaccaagagaacttggacttggcgaatgtcaacctgatgctg
gaactgctggttcagaagaagaagcagctagaggcggaatctcaagcagctcagagacag
atccttagggagttcctcaaagaagccagaagaaacaagagagagcaactggagcagcta
cagaaagagctcaactttcttgaagaggacataaagcgtgttgaggaaatgagtggcctg
tactctccaatgatggaggcagagtgcacggtgcctaatgtggaggctccctcaccagca
cccagctgcagtagtattattgagccaccagattacagccaacctccaggatttggtgga
acaacccagggaaaacgacagacctggtataacagcaccctggcgtcaagaagaaagagg
ctcacagctcacttcgaggatctagaacagtgctacttctccaacaaaatgtctcgcatc
acagatgagggcaggaatctgaaccagcttgatgatttcatggagtgtttgtccaagttc
actcgttacaactctgtgcggccgctggccaccctctcctacgccagtgacctttataat
ggctccagtattgtctccagtattgagtttgaccgtgactgtgactactttgccattgct
ggtgtgaccaagaagatcaaggtatttgagtacggcactgtgatccaggatgcagtcgac
atccactaccctgtcaacgaaatgacctgcaattccaaaatcagctgtatcagctggagc
agctatcacaagaaccttctggccagcagtgactatgaggggactgtcatcctgtgggat
ggattcaccggccagaggtccaaagtctatcaggaacatgaaaagaggtgttggagtgtt
gacttcaatctgatggaccccaagctcttagcctctggttctgatgatgctaaagtgaag
ctatggtcaaccaatcttgataactcagtggccagcatcgaggccaaggccaacgtctgc
tgcgttaaattcagtccaacttcccgatatcatctggcctttggctgtgcagatcactgt
gtccactactatgatctccgcaacactaagcaaccaatcatggtgttcaaaggtcatagg
aaagccgtgtcctacgccaagtttgtcaacggagaggaaattgtttctgcttcgacagac
agtcagctgaagctgtggaacgtcaacaaaacccactgtctgcgctccttcaagggtcac
atcaatgagaaaaactttgtaggcctcgcttcaaatggagactatgttgcctgcggaagc
gagaacaactccctttacctttactacaaaggactttccaagactttgttaacattcaag
tttgacacggtgaagagtgtcctggacaaggataagaaggaagacgacacaaacgagttc
gtcagtgccgtctgttggagggccctgcctgacggagaatcaaatgtgctgattgctgca
aacagtcaaggaacaatcaaggtacttgagctcgtctga

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