Paralichthys olivaceus (Japanese flounder): 109646879
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Entry
109646879 CDS
T06037
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109646879
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pov02000
]
109646879
Transporters [BR:
pov02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109646879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
MukB
Motif
Other DBs
NCBI-GeneID:
109646879
NCBI-ProteinID:
XP_019968212
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MKTGSQIRLLLWKNWTLRKRQKIRFLVEICWPVLLFIGLVWLRKANPLYQQHECHFPNKA
MPSAGILPWMQGIFCNANNPCFRYPTRGESPGVVSNYNNSVLARFYVDVQELLLNEAEVQ
QLGRLWGEMTSFSNFMDTLRKNPSVVSGRGLKIEDILKDDEVLTAFLLRDAGLSNSVIHQ
LVNAQLRLEQFAYGVPDLQLKDIACSQALLEHFIIFPSRMGLHVVRNAMCALSQQRLQKI
EDILYSNLDFFKIFKRMPQVLDSSSQGVDLHFWGRALKALSENVQLLTERASSQELLKAV
SSLFRSGGPPSFTQLMSSVSGLFCGYLEGGGSRVLSFNWYEDNNYKVFLGVNGTKNKNYV
YDTSATPFCNALMESLESNPVTKIVWNSVKPLLMGKILYTPDSPAVRKILKSANTTFEEL
ERLQNMAKSWEELGPQLWAFFHSSVQMNMIRDTLRNPTVMHFVDTSLEDTDFTTKDILNF
LHSGPEEQREASMPNFDWRNIFNITDQMIRMFNNYGECISLDKFVAFTDESQMIHQALYL
LEENKFWAGVVFMDMYPWSTSVPPHVKYKIRMDIDAVERTNKIKDRYWDPGPRADPMEDQ
RYIWGGFAYLQDMIEHGIIKLHTDNDWPLGVYVQQMPYPCYVDDHFMITLNRCFPMFMVL
AWIYSVSMTVKSIVLEKELRLKETLKAMGVDNGAIWYTWFIDSFVMMTASTALLTSIIMG
GKVLNYSDPVLIFFFLLTFTVTTIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHVLCFA
WQDRITKNMKLAASLLSPVAFGFGTEYLSRYEEQGLGLQWDNIQTSPLEKDTYSFLTSVL
MMALDAVLYGVLAWYLDNVFPGQYGIGQKFYFPFQPSYWQRSASSHSEMDDPDPEKPEPD
DLEKNVEGRDTPEIYTCNGSSRRTCKHQGKRRQLEREKELLRRQQETPNEDEEGQDSGRE
GQLFFEPEPVGLMLGVQIQELVKVFHGSSRPAVNCLNINFYEGQITSFLGHNGAGKTTTM
SILTGLFPPTSGTAFINGRDIRTDIDIIRSSMGMCPQHNILFKHLTVEEHILFYSLLKGR
TQAEAEKEVEDMLVDLGLPHKRHDEAQNLSGGMQRKLSVAMAFVGGSKVVILDEPTSGVD
PYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRIAILSKGQLHCCGSPLFLKNCFGV
GFYLTLVRRMKDLRKREVSFNSDTKSTSCSLHLDRVLDGDIENITSLIHHHVPDAKLIEM
IGQELTYLLPNKGFKHRAYASLFRELEETLNDMGLSSFGISDTSLEEIFIKVTADGEAAN
NSTTPEHNGVNGTTHGASDSSAGKGSRQVKGAALTSKQFHALLVKRFHHASRSQKDFLAQ
IVLPASFVLIALIFTTIVPPFGEYPSLTLTPWMYGEQFTFFSNEQPFDPKMKHFTERLSA
PPGLGTRCMEGEPLGDFTISLYSSPPRMPCGNITSAWAFPDVPPVVSNILESPEWNQRNP
SPTCLCSSSKKLTMMPICPAGAGGLPPRQRTEATGDTVLDLTNRNISDFLVKTYPSLIRT
SLKSKYWVNEQRYGGLSVGGQLPILNVNPKDIQTVFHQLGQILNITGGYYSELALREIGP
FLRYMESEFNVKVWYNNKGWHAMVAFMNVANNAILRAFLPPGANPVKFGITAINHPLNLT
KEQLSEVTVLTTSVDAVVAICVIFAMSFIPASFILYLIQERVTKAKHLQFVSGVSPLVYW
VANFFWDMINYSLSTAMVIGIFMAFDKKCYTSPTNLPALIALLLLYGWSVTPMMYPLSYI
FDIPSTAYVSLSCINLFIGINSSAITFILELFENNRSLLMVNEWLKKVLLVFPHFCLGRG
LIDMAMNQAVTDVYARFGEEHTVNPFRWDFVGKNLTFMAVEGFIYFILNLLIQYRFFSDR
WLSDYKQTAVRDEDDDVATERLRIYEGGSKTDILQIRDLSKTYVGRKRAAVDRICVGVPA
GECFGLLGVNGAGKTTTFKMLTGDTDVSSGEATVAGYSILTEILDVHQNMGYCPQFDAID
ELLTGREHLYLYARLRGVPESEIPRVAEWGVQKLGLTEYAGVCAGTYSGGNKRKLSTAIA
MIGCPALVLLDEPTTGMDPHSRRFLWNAIMSVIQDGRAVVLTSHSMEECEALCTRLAIMV
NGTFKCLGTIQHLKYKFGDGYIVTMKIKAAKAGVSPELEPVESFIESCFPGCVQREKHYN
TLQYEIASSSLARIFQVVVANKERLSIEDYSVSQTTLDQVFVNFAKQQTGEDEDVTLQRR
MAGGRKDVKIAPVKRKT
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaggctctcagatccgcctgttgttgtggaaaaactggactctccgcaagaga
cagaagatccgcttccttgtggagatctgctggccggtgttgttattcattggtctggtg
tggctgaggaaagcaaatccactgtaccagcaacatgaatgtcacttccccaacaaggcc
atgccctccgcaggcatcctgccctggatgcagggcatcttctgcaacgccaacaacccc
tgcttcagatacccaaccaggggagagtctccaggagtcgtctccaactacaacaactca
gtactggctcggttctatgtcgacgtccaggagcttctgctcaatgaggccgaggtccag
cagctcggacgactttggggagaaatgacgtctttctcaaacttcatggacacgttacgg
aaaaacccatcagtggtgtcaggccgtgggctcaagatagaagacattctgaaggacgac
gaggttctcacagccttcctgctgcgagacgccggcctctcgaactccgtcatccaccag
ctggtcaatgcacagctgcgactggaacagtttgcctatggcgtcccggacctgcagctg
aaggacattgcgtgcagtcaggcgttgctggagcacttcatcatcttccccagtcgcatg
ggactccacgtggtccgcaacgccatgtgtgccctcagccagcaaaggctgcagaagatc
gaggacatcctctactccaacctggacttcttcaagatcttcaaacggatgcctcaggtt
ctggacagcagctcccagggggtcgacctgcacttttggggtcgggccctcaaggcgttg
tcagagaacgtccaacttctgacggagcgggcgagttctcaggagctgctgaaggccgtc
tcctctctgttcagatccgggggtcctccctccttcacccagctcatgtccagcgtgtca
ggcctcttctgtggttacctggagggaggcggctccagggtcctgtccttcaactggtac
gaagacaacaactacaaggtgttcctgggggtcaacggcaccaagaacaagaactatgtc
tacgatacgtctgccactccgttctgcaacgccctcatggagagcctggagtccaaccct
gtcacaaaaattgtgtggaattcagtcaagcccctgctgatgggaaagatcctgtacacc
ccagactcccctgccgtccgcaagatattaaagagtgccaacacgaccttcgaggagcta
gagaggctccagaacatggccaagtcctgggaggagctgggacctcagctctgggctttt
ttccacagcagcgtccagatgaacatgatcagggacaccctgagaaaccccacagtgatg
cactttgtggacaccagcctggaggacactgactttaccaccaaagacattctgaacttc
ctgcacagtggtcctgaggagcagcgggaggcgagcatgccaaactttgactggaggaac
atttttaacatcactgaccagatgattcgcatgttcaacaattatggagagtgcatcagt
ctggataagtttgtggccttcacagacgagtcccagatgatccaccaagccttgtacctg
ctggaggagaataaattctgggcgggcgtggtcttcatggatatgtacccctggtccaca
agtgttccgccacacgtcaagtataagatccgcatggacatcgatgcagtggagcgcacc
aacaaaatcaaagacaggtactgggaccccggcccccgagctgaccccatggaggaccag
aggtacatctggggaggctttgcatacctgcaggacatgatcgaacacggcatcatcaag
cttcacacagacaacgactggccgctcggggtctacgtccagcagatgccttatccttgt
tacgtggatgatcacttcatgatcacactgaaccgctgcttcccgatgttcatggtgctc
gcctggatctactctgtgtccatgacggtgaagagcatcgtgctggagaaggagctgcgc
ctcaaggagaccctcaaggccatgggggtcgacaacggtgccatctggtacacgtggttc
atcgacagcttcgtcatgatgaccgcgagcacggcgctgctcacctccatcatcatgggt
gggaaggtgctgaattacagcgaccctgtcctcatcttcttcttcctgctgacgttcacc
gtcaccaccatcatgcagtgcttcttgatgagcgtgttcttcaacaaggccaacctggcg
gcggcgtgcagcggcatcatctacttcaccctctacctgcctcacgtcctctgcttcgcc
tggcaggaccgcatcaccaaaaacatgaagttggcagctagcttgttgtctccggtggcg
ttcggcttcgggacagagtacctgtctcggtacgaggagcagggtctgggtctgcagtgg
gacaacatccagaccagcccgttagagaaggacacctactccttcctcacctccgtcctc
atgatggcactggatgctgtcctctacggtgtccttgcctggtatctggacaatgtcttc
ccaggacagtacggcattggtcagaaattctacttcccatttcagccctcgtactggcaa
agatctgcatcttctcattcagagatggatgatccagatcctgagaaacctgaaccagac
gacctggagaagaatgtggagggcagagatacgccagagatttacacctgcaatggctcc
agcaggagaacgtgcaagcaccaaggcaagaggaggcagctggagagagagaaggagctg
ctgagacgacagcaggaaactcccaacgaggacgaggagggtcaggactcagggagggaa
ggccagttgttctttgagcccgaacctgtgggcctgatgttgggggtgcagatccaggag
ctggtgaaggtgttccacggaagctctcgaccagcggtcaactgtctcaacatcaacttc
tacgaaggacagatcacgtccttcttaggtcacaacggggccggaaaaaccacaactatg
tccatcctgactggactgttccctcctacatctggcacagccttcattaatggaagagac
attaggacggacatagacatcatccgttcttctatgggcatgtgtcctcaacacaacatc
ctcttcaaacatctcacagtggaagagcacatcctgttctactcgctgctgaagggtcgg
actcaggcggaggcagagaaggaggtcgaggacatgctggtggatctcgggctgcctcac
aagagacacgatgaggctcagaacctctcaggaggaatgcagaggaaactgtctgttgcc
atggcattcgtcggagggtcaaaggtcgtcatcctggatgaacccacctctggagtagac
ccatattccaggagatctatttgggatctcctgttaaaatacagaactggccggacagtg
attctgtcgacccatcacatggacgaggccgacttgctgagcgaccgcatcgccatcctc
tccaagggacagctgcactgctgcggatccccgctcttcctcaagaactgtttcggagtt
ggtttctatctgacgctcgtaagacgcatgaaggacctgaggaagagggaggtgagtttc
aactctgacaccaagtcaaccagctgcagtcttcacctggaccgagttctggatggggac
atagaaaacatcaccagcctcatccaccaccatgtcccagatgccaaactgattgagatg
attggacaggagctcacctacctgctccctaataaaggattcaagcaccgtgcgtacgcc
agcctgttcagggagctggaggagactctgaatgatatgggcctcagcagttttggcatc
tcggacacatcattagaggagatattcataaaggtcactgcagatggagaagcagcgaat
aattccaccactcctgaacacaatggcgtgaacggcactacccatggtgcatcagacagc
agtgcaggaaagggctcccggcaggtgaaaggtgccgctctgacctcgaagcagttccac
gcgctgctcgtgaagaggtttcatcacgccagcagaagccagaaagacttcctggcacag
atcgtccttcctgccagcttcgtcctgatcgctctgatcttcaccacgatcgtccctccg
tttggagagtaccccagtctgactctaactccctggatgtacggagaacagttcactttc
ttcagcaacgagcagccgttcgaccccaaaatgaaacacttcacggagcgtctgtcagct
ccacccggcctggggacacgctgcatggaaggagaaccactaggtgattttaccatttct
ctttactcctctccacccagaatgccctgcggtaacatcacatcagcgtgggcgtttccc
gacgtcccccctgttgtcagcaatatcttagagagtcctgagtggaaccagagaaacccg
tctccgacctgcttgtgcagctccagtaagaagctgaccatgatgcccatctgtcccgcc
ggagccggaggccttccccctcgccagcgaaccgaggccacgggagacactgttctggat
ctgacaaacaggaacatctccgacttcctggttaaaacctaccccagtctaataagaacc
agtttgaagagcaaatactgggtgaatgagcaaaggtacgggggtctgtcagtaggagga
caacttcccatcctgaacgtgaaccccaaagacatccagactgttttccatcagctcgga
cagatcctcaacatcacagggggttactattcagaacttgccctgcgggagattggtcct
ttcttacgatacatggaaagtgaatttaatgtgaaggtctggtataataacaaaggctgg
cacgccatggtggctttcatgaatgtggccaacaacgccatcctgagggccttcttaccc
ccaggggccaaccctgtgaagtttggaatcacggccatcaaccatccgctaaacctcacg
aaagagcagctctctgaagtcactgtgttgaccacctcagtggacgcagtggtggcgatc
tgtgttattttcgccatgtccttcatccccgccagcttcatcctctacctcatccaggag
cgggtcaccaaggccaagcacctgcagtttgtcagcggcgtgagtccgttagtttactgg
gtggccaacttcttctgggacatgattaattactctctcagcactgcaatggtgatcggc
attttcatggcttttgacaaaaagtgttacacgtcaccgaccaacctgcctgcactgatc
gcactgctcctcctctatggatggtcggtgacgcccatgatgtatcctctgtcctacata
ttcgacatcccgagcaccgcgtacgtctccctgtcctgcatcaacctgttcataggcatc
aacagcagcgccatcaccttcatcctggagctttttgaaaacaatcggtctttgctgatg
gttaacgagtggctgaagaaagtcctgctggtgttccctcacttctgcctggggcgaggc
ctgatcgacatggccatgaaccaggctgttactgatgtctatgccaggtttggtgaagag
cacacagtcaacccgttccgctgggactttgtggggaaaaacctcaccttcatggcagtg
gaaggtttcatctactttattctcaaccttctgatccagtaccggttcttctcggaccgc
tggttatcagactacaaacagactgctgtacgagatgaagacgacgatgtggcaacagag
aggctgaggatttatgaaggagggagcaagacagacatcctgcagatcagagacctctct
aagacgtatgtgggcaggaagagggcagctgtggaccggatttgtgtgggagtccctgca
ggagagtgcttcggcctcttgggagttaatggagctggaaagacgacgaccttcaaaatg
ttgactggtgacactgatgtcagctccggggaggcgacggtggccggttacagcatcctg
acagagattctggacgtgcaccagaacatgggctactgtcctcagtttgacgccatcgat
gagctcctcaccggcagggagcatctgtacctgtacgctcgtctcagaggggttccagag
tcagagatcccgagagtggcggagtggggcgtccagaagctgggtctgacggagtacgcg
ggtgtctgtgcggggacgtacagcggaggcaacaagcgtaaactctccactgctatagcg
atgatcggctgcccggcgctggtgctgctggacgagcccacgacggggatggacccacac
tctcgtcgcttcctgtggaacgccatcatgagcgtcattcaggatggccgggccgtggtg
ctgacatcccacagcatggaggagtgtgaggcgctctgcacacgactggccatcatggtc
aatgggaccttcaagtgtttgggaaccattcagcatctcaagtacaaatttggtgacggc
tacatagtgaccatgaaaatcaaggcagctaaagctggcgtgtccccagagctggagcct
gtggagagcttcatcgagagctgcttccccggctgcgttcagcgggagaagcactacaac
acgctgcagtacgagatcgcctcctcctccctcgccaggatattccaggtggtggtggcc
aacaaagaacggctgagcatcgaagattactctgtgtctcagacgacactggaccaggtg
tttgtcaactttgccaagcagcagacaggagaggacgaggacgttacattacagcgacga
atggcgggaggaagaaaagacgtgaagatcgccccagtgaagaggaaaacatga
DBGET
integrated database retrieval system
