Paralichthys olivaceus (Japanese flounder): 109646954
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Entry
109646954 CDS
T06037
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109646954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pov03400
]
109646954
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109646954
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_IV
MutS_III
AAA_27
Levi_coat
Motif
Other DBs
NCBI-GeneID:
109646954
NCBI-ProteinID:
XP_019968285
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MRLDLVESFVCDSELRHTCQEDLLRRFPDLHRLAKKFHRHTATLQDCYRVYQAVTQIPAL
TAAIERYSGSYQVLLEAVFLSPLRDLHSDFIKYQEMIETTLDMNQIDHHEFLVKASFDPV
LSELREKMDTLDKSMQAVLNSAARELGLDAGKTVKLESNAVLGFYLRVTCKVEKTLRNNK
KFTTLDVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEIISIASGYVDPLQTLSD
VIAQLDAVASFAVASVSAPVQYVRPRILVDGCRRMELLQARHPCMETDPDTAFIPNDITF
VHGQKNFYIITGPNMGGKSTFIRQVGVIALMAQIGCFVPCEKAELSVVDSVLARVGAGDC
QVKGVSTFMSEMLEIAAILRSATENSLIIIDELGRGTSTYDGFGLAWAISEHIASKISGF
CLFATHFHELTALAAHEPTVHNLHVTALTSHDTLTMLYRVKLGQTCGFTHAFVFLFLKGL
FSIFTQRQMESEIEEHIDSAT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaggttggacttggtggagagtttcgtgtgtgactctgagctcaggcacacctgccag
gaggacttgctgcggcggtttcctgatctccaccgtctggccaagaagttccatcgtcac
actgcaacgctgcaggactgttaccgcgtctaccaggctgtgacccagatccccgccctc
accgcggccatcgagagatactcaggcagctaccaggttctgttggaggccgtgttcctc
tcccctctcagagacctgcactctgacttcatcaaatatcaggagatgatcgaaaccacc
ctggacatgaaccagatcgaccaccatgaatttctggtgaaggcgtcgtttgatccggtg
ttgagtgagctgagagaaaagatggacacgctagataagagcatgcaggcagtgctgaac
agcgcagccagagaactaggtctagacgccggtaagacggtgaagctggagtcgaacgcc
gtgctgggcttttacctgagagtcacctgcaaggtggagaagactctgaggaacaacaag
aaattcaccacgctggacgtccagaagaacggagtgcgtttcaccaacagcaagctgagc
tctctgaatgaggagtacaccaagagcagggaggagtacgaggaggcgcagaacgccatt
gtcaaagagatcatcagcattgcctcaggctacgtggatcccctccagacgctgagcgac
gtgatagcgcagctggacgcagtggcgagtttcgccgtggcgtccgtctccgctcctgtg
cagtacgtgcggcctcgcatcttggttgacggctgcaggcgcatggagctgctacaggcc
agacacccctgcatggagacagacccggacacggccttcatacccaacgatatcaccttc
gtccacggacagaagaacttctacattataacaggaccaaacatgggaggcaaatcgaca
tttatccggcaggtgggtgtgatcgctctgatggctcagattggctgctttgtgccatgt
gagaaggcagagctgagcgtggttgacagcgtcctggccagggtgggagcgggggactgc
caggtgaaaggcgtgtccaccttcatgtccgagatgttggaaatcgccgccattctccgc
tcggccactgagaactcgctgatcataatcgacgagctcggcagaggcacgtccacgtac
gacggcttcggtctggcctgggccatcagcgaacacattgcctccaaaatcagcggcttc
tgcctgtttgccacgcacttccacgagctgacggcgctcgcagcccatgagcccaccgtt
cacaacctgcacgtcacggccctgacctctcatgacaccctcaccatgttgtacagggtg
aaactaggtcagacatgtggtttcacgcatgcatttgtgtttttattcctcaagggactt
ttcagcattttcacacaaagacagatggaaagtgaaatagaggaacatatcgattcagct
acatga
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