Paralichthys olivaceus (Japanese flounder): 109646967
Help
Entry
109646967 CDS
T06037
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03013
Nucleocytoplasmic transport
pov03015
mRNA surveillance pathway
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109646967 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
109646967 (eif4a3)
03015 mRNA surveillance pathway
109646967 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109646967 (eif4a3)
03041 Spliceosome [BR:
pov03041
]
109646967 (eif4a3)
03009 Ribosome biogenesis [BR:
pov03009
]
109646967 (eif4a3)
03012 Translation factors [BR:
pov03012
]
109646967 (eif4a3)
Enzymes [BR:
pov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109646967 (eif4a3)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109646967 (eif4a3)
mRNA cycle factors
Stress granule specific factors
109646967 (eif4a3)
Spliceosome [BR:
pov03041
]
Complex C
Other components
EJC/TREX
109646967 (eif4a3)
Ribosome biogenesis [BR:
pov03009
]
Eukaryotic type
90S particles
Helicases
109646967 (eif4a3)
Translation factors [BR:
pov03012
]
Eukaryotic type
Initiation factors
eIF-4
109646967 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109646967
NCBI-ProteinID:
XP_019968297
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAGAQGRKRILKDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgccggggctcagggtcggaagaggatcctgaaggacgaggacatgaccaag
gtggagtttgagaccagcgaggaggtggacgtcacccccaccttcgacaccatggggctg
cgggaggaccttctccgcggcatctacgcctacgggtttgagaaaccatctgcgatccag
cagcgagccatcaaacagatcattaaaggccgagacgtcatcgctcagtctcagtctgga
accggaaagacagcgacgttctgtgtgtctgtgctgcagtgtctggacatccaggtgagg
gagacccaggcgctgatcctcgctccaaccagagagctggctggacagattcagaaggtg
cttctggctctgggagactacatgaacgtccagtgtcacgcctgcatcggaggaactaac
gtgggggaggacatcaggaaactggactacggtcaacacgtggtggctgggacacctgga
cgggtgtttgatatgattcgtcgcaggagtttgaggacgagagccatcaagatgctggtg
ctggacgaagctgacgagatgctcaacaaaggttttaaggagcagatctacgacgtgtat
cgttacctgccccccgccacacaggtggttctgatcagtgccacgctgccgcatgagatc
ctggagatgaccaacaagttcatgacagaccccattcgcatcttggtcaaacgtgatgag
ttgactctcgaggggattaaacagttcttcgttgccgtggagagggaggagtggaagttt
gacactttgtgtgatctgtacgacacgctgaccatcacacaggccgtcatcttctgtaac
accaagagaaaggtggactggctgacggagaagatgagagaggcaaacttcacagtgtcc
tcgatgcacggagacatgcctcagaaagagagagagtccatcatgaaggagttcagatca
ggagccagtcgcgtgttgatctccacagatgtctgggctcggggtttagacgttcctcag
gtttctctgatcatcaactacgacctgcccaacaacagagagctctacatccacaggatt
ggtcgatccggtcgttatggtcgtaaaggtgtggccattaacttcgtgaagaacgacgac
atcaggatcctgagagacatcgagcagtactactccacccagatcgacgagatgcccatg
aacgtggccgacctgatctga
DBGET
integrated database retrieval system
