KEGG   Paralichthys olivaceus (Japanese flounder): 109647007
Entry
109647007         CDS       T06037                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Brite
KEGG Orthology (KO) [BR:pov00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pov04812]
    109647007 (katnb1)
Cytoskeleton proteins [BR:pov04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     109647007 (katnb1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_SCAP NBCH_WD40 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_IFT140_2nd RMC1_N Beta-prop_LRRK2 PROPPIN Nucleoporin_N WDR54 Ge1_WD40 Beta-prop_NUP159_NUP214 VPS8_N WD_LRWD1 Beta-prop_NWD2_C Beta-prop_WDR75_2nd Beta-prop_IFT122_2nd Cytochrom_D1 PD40
Other DBs
NCBI-GeneID: 109647007
NCBI-ProteinID: XP_019968339
LinkDB
Position
Unknown
AA seq 431 aa
MSSGVQRLKPASGTSMAAASTTKISWRLQEFEAHSSSVSCLALGQSSGRLLATGGEDCRV
NIWAVSKANCIMSLTGHKSPVECVQFNMSEEQVVAGSQSGSIRVWDLEAAKILRTLMGHK
ANITSLGFHPFGDFLASSSLDTSIKLWDVRRKGYVFKYKGHTQAVRSLAFSPDGKWLASA
SDDCTIKLWDLTQGKTITEFKSHSAAVNIVQFHPNEYLLASGSSDRTVKLWDLEKFTMIG
SMEGNTTPVRCVCFSPDGACLYSGCTDSLRVFGWEPDRCLDVVTVDWGKVSDLAVCNQQL
IGVSHQLSSVSSYVVDLKRVKKSGGSVIQGIIQDFQPLTEPKEPKGAALRKSYDRPTTTC
GSQRVKQRSESERRSPEGQRRSPSEDEAEEKASSAEIHNAEDFKEIFQPKNAICRSTVSI
TPGLMNQNHVS
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtccagcggtgtccagcgtctcaaaccagccagtgggaccagtatggctgctgccagc
accaccaagatctcatggcgactgcaggagttcgaggctcactccagcagcgtctcctgt
ttggctctggggcagagctccggccgcctgctggccacaggaggagaggactgcagggtg
aacatctgggctgtgagcaaagccaactgcatcatgagtttgactggtcacaagagcccg
gtggagtgtgtccagttcaacatgtcagaggagcaggtcgttgctggttctcagtctgga
tccatacgagtctgggacctggaggctgcaaagattttaaggactctgatgggacataaa
gcaaatatcaccagtctgggcttccacccatttggagacttcctcgcgtccagctccctg
gacacaagcatcaagctgtgggacgttcggaggaaaggatatgtgttcaaatacaagggt
cacactcaggccgtcagaagtctggccttcagtcctgatgggaagtggttggcttcagcc
agtgacgactgcaccatcaagctgtgggacctgacccaggggaagaccatcacagagttc
aaatctcactccgccgccgtcaacatcgtccagttccaccccaacgagtacctgctggcc
tcaggcagctccgacagaaccgtcaagctgtgggatctggagaagtttaccatgattggt
tcgatggagggaaacacgactccagtcaggtgtgtatgtttcagtccggacggcgcctgt
ctctacagcggctgtacagactctctgcgggtctttggctgggagcctgaccgctgcctc
gacgtggtgacggtggactggggcaaagtctctgatctggcagtctgcaaccagcagctg
atcggcgtgtctcaccagctctccagcgtctcgtcgtacgtggtcgatctgaagagggtg
aagaagagcggcggctctgtgatccagggaatcatccaggacttccagccgctcaccgag
cccaaagaacccaaaggagccgcactgcgaaagagctacgaccgacccacgaccacctgc
ggctcacagagggtgaaacagaggtccgagtctgagaggcggagccctgaaggtcagagg
cggagccccagtgaggacgaggcagaggagaaggcgtcgtcagcagagatccacaacgct
gaagacttcaaggaaatctttcagcccaagaacgccatctgtaggtcgactgtcagcatc
acaccaggactaatgaaccagaatcacgtttcg

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