Paralichthys olivaceus (Japanese flounder): 109648228
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Entry
109648228 CDS
T06037
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03022
Basal transcription factors
pov03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109648228 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
109648228 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pov03021
]
109648228 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
pov03400
]
109648228 (gtf2h1)
Transcription machinery [BR:
pov03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109648228 (gtf2h1)
DNA repair and recombination proteins [BR:
pov03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109648228 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
109648228
NCBI-ProteinID:
XP_019969582
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYADIRCQKISPDGK
SKVQLQLVLHTGESTTFHFSNESSAIKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLGGVNNADPALYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTSFFQSHYFHRDRINTGTQ
DIFSECAKQDEMGLKSMVTQGVKNPLVDLLSLEDKSLDEGYGVSTTLPSTSNANRTVKES
SNSAIIKRFNHHSAMVLAAGSRKGETPTDQASETSSTDGNSRDSDFFQPPVKKVKLQEAI
EYDDLQGENRPKTVPLKLKKSDRYAHGPVPLQSQQYTTSQEIINSVNCIRHEMANYKPNL
TQVLSSTAASSAIAALSPGGVLMQAGTQQAINQMIPTDVQGELKHLYVAAAELLRHFWSC
FPVNTPFLEEKVMKMKTNLERFQMTKLRPFQEKIQRQYLSTNLTGHLEEMLQTAYNKFHA
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatcactgtcagaagaagtgctgctggtggtgaagaaggttcgccagaggaagcag
gatggaacactttatctgatggctgaacgtatagcctggggtccggagggcaaggaccgc
ttcacagtcagccacctatatgcagatatccgctgccagaagatcagcccggatggtaaa
tccaaagttcagctccagttggtccttcacaccggcgagagcaccacattccacttttcc
aatgagagcagtgcgatcaaagacagagacgctgcgaaggagctgctgcagcagctgctg
cccaagttcaagaagaaggccaacaaggagctggaggagaaaaacaggatgcttcaagag
gatcctgtgcttttccagttatataaagatctagtggtgagccaggtgatcagtgcagag
gaattctgggccaacaggttagggggcgtaaacaacgcagacccagcactgtacaacaac
aagcaggaagtcggtatatctggagcctttctggcagacataagacctcagacagatggc
tgcaatggtttgagatataatctaactgctgacattattgaatccatcttcagaacatac
ccggcagtgaaacagaagtatagtgaaaatgtgccccataacctgacggagaaggagttc
tggaccagctttttccagtcccattattttcacagagaccgcatcaacacaggaacacag
gatattttctcggagtgcgccaagcaggatgagatggggttaaagtcgatggtgactcaa
ggagtgaagaatcctctggttgacctcctgtcgttagaggataaatcattagatgagggt
tatggagttagcacaacactaccttcaacttccaatgcaaaccggacagtgaaggagagc
agcaactctgccatcataaagcgcttcaaccatcacagtgccatggtgctggcagctggc
tcacgaaagggtgaaacaccaacagaccaagcaagtgagacaagcagcacggatggaaac
tcgagggattcagacttctttcaacctcctgtaaagaaggttaagttacaagaagcgata
gaatatgatgatctccagggggaaaacagaccaaaaacagtcccactgaagcttaagaag
tctgacaggtatgctcatggtccagtgccacttcaatcccaacagtatacaactagccag
gagatcatcaactctgtcaactgcatccgccatgagatggccaattacaaacccaacctc
actcaggtgttgtccagcacagcagcgagttctgccattgctgcactttctccaggtggc
gtcctcatgcaggcaggaacgcagcaagccataaatcagatgatacccactgatgttcaa
ggagagttgaagcatctctacgtagctgctgcagagctattgagacacttctggtcctgt
tttcctgtaaacactccatttttggaagagaaggtaatgaaaatgaagacaaacttggag
agatttcagatgaccaagcttcgaccttttcaggagaagattcagcgccagtacttaagt
acaaatctcacagggcacttggaggagatgctgcagactgcctacaacaagttccacgcc
tggcaaacccgtcggatgatgaggaaaacctga
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