KEGG   Paenibacillus sp. 32O-W: IJ21_16270
Entry
IJ21_16270        CDS       T04219                                 
Name
(GenBank) single-stranded DNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pow  Paenibacillus sp. 32O-W
Pathway
pow03410  Base excision repair
pow03430  Mismatch repair
pow03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    IJ21_16270
   03430 Mismatch repair
    IJ21_16270
   03440 Homologous recombination
    IJ21_16270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pow03400]
    IJ21_16270
DNA repair and recombination proteins [BR:pow03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     IJ21_16270
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IJ21_16270
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      IJ21_16270
SSDB
Motif
Pfam: RecJ_OB DHH ssDNA-exonuc_C DHHA1 LysX_preATP_grasp
Other DBs
NCBI-ProteinID: ALS27029
UniProt: A0A0U2WHQ0
LinkDB
Position
1818978..1821431
AA seq 817 aa
MIKPKTRWDVGQWTPVQDERAAKLAAALKLPPLVARLLVARGVDEPEAARLFLEAGPEHM
HDPYRLKGMEEAVERIRRTTADGGKIRIYGDYDADGVSATSLLIRLFRRLGYDFDYYIPD
RLKEGYGLNRPAIDQAAAAGVRLLLTVDTGVSAVDEVAYARELGMEVVVTDHHEPPEVLP
EAHALINPKQPGCPYPFKGLAGAGVAFKLAHALTGEPPLELADVAALGTIADLMPLTGEN
RILVRCGLAQMRGGSVPGLRALAEKANVNLAAVTAADVAFGMAPRVNASGRLSHADHAVT
LLTTERSEEAEEKAALLDGLNRERQKIVDAIVREAEEMWEARCDRARREGETEPPVIVLA
GEGWNVGVIGIVASKLLEKHYKPTVILSVDGETGLCKGSARSIDGYDLHAALTSCAELFE
HFGGHQAAAGMTLHRDRLAELERRLGEWALRTLTDEDWIPKTRVDLVCALEEASVETIEQ
LDRLQPFGADNPSPRVLIANVNVADRRTMGKDGKHLKLSLAGGGRLLDAVGFGMGGYAEQ
LAQGAYVSVIGELAMNEWNGNRRPQLLMKDLRVEQVQLFDLRGEREPLAALRAVLERTAA
RERSAAVLAATQAWAEAAAGAAQPEQGAENGTLSFYTFESMPDEGICCEELVLLGEPASG
ERLAAVLERCNGLEAVHAIYRQERASPGRTRRFPGREQFAKVYQLLRRAERLPERGLSER
LAAMAGLPADTVEMMLDVFAELAFIERREGSIYVNPSPQKRELSESARYRAAVREAESAS
ILHAPYKELSGWIAERSARRTGTLNGGATISSPERMT
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgatcaaaccgaaaacaaggtgggatgtcggccagtggacgcccgttcaggatgagcgg
gccgcgaagctcgccgccgcgctgaagctgccgccgctcgtcgccagactgctggtggcg
cgaggcgtggacgagccggaggcggcaaggttgtttctcgaggcggggccggagcatatg
cacgacccgtatcggctgaaggggatggaagaagcggtcgagcggattcgcaggacgacg
gcggatggcgggaaaatccgcatttacggcgattacgacgccgacggcgtatcggcgacc
tcgctgctgatccggctgttccggcgcctcggttatgacttcgattattacataccggac
cgcttgaaagaaggatacggtctgaaccggccggccatcgatcaggccgcggccgccggc
gttcgcctgctgctgacggtcgataccggggtgagcgcggtcgatgaagtggcttatgcg
cgcgagctcggcatggaagtcgtcgtcacggaccatcacgaaccgccggaagtgcttccg
gaagcgcatgcgctcattaatccgaagcagccgggatgcccgtatccgttcaaaggactg
gccggcgccggcgtcgccttcaagctcgcccatgcgctgacgggcgagccgccgcttgaa
ctcgccgatgtcgcggcgctcggcacgatcgccgatctgatgccgctcaccggcgaaaac
cgtatcctcgtccgctgcggcctcgcccagatgcggggcggcagcgttccgggcttgcgg
gcgctggccgagaaggcgaatgtgaacctggccgccgtaacggccgccgatgtcgcattc
ggcatggcgccgcgggttaatgcgagcggccggttgtcccatgccgatcatgccgtcacg
ctgctcacgacggagcggtccgaggaagccgaagagaaagcggcgctgctcgacgggctc
aatcgggaaaggcagaaaatcgtcgacgccatcgttcgcgaagcggaggagatgtgggaa
gcgcgctgcgaccgcgcgcggcgcgaaggagagacggagccgccggtcatcgttctcgcc
ggggaaggctggaacgtcggcgtcatcggcattgtggcgtccaagctgctggagaagcac
tacaagccgacggtcatcctctccgtcgatggcgagaccggcttatgcaaaggctccgcc
cgttccatcgacggctatgaccttcatgctgcgcttacttcatgcgccgagctgttcgaa
catttcggcggtcatcaggctgcggccggcatgactcttcatcgcgaccggctggcggag
ctcgaacgccggcttggcgagtgggcgctgcggacgttgacggatgaagactggattccg
aaaacgcgcgtcgatctcgtatgcgctttggaggaagcttcggtcgagacgatcgagcag
ttggacaggcttcagccgttcggcgcggacaatccgtctccgcgcgtcctgatcgcgaac
gtcaatgttgcggacaggagaacgatgggcaaggacggcaagcatctgaagctgtcgctc
gcgggcggcggccggctgcttgacgcggttggtttcggtatgggcgggtatgccgaacag
ctggcccagggcgcatatgtcagcgtaatcggcgaacttgcgatgaacgaatggaacggc
aaccgccgtccgcagctgctgatgaaagatttgcgggtagagcaggtgcagctgttcgat
ctgcgcggggagcgcgagccgcttgccgcgctgcgcgccgttctggaacgaacggccgcg
cgggaacgttcggcggccgtattggcggcgacgcaggcgtgggccgaggcggcggccggc
gccgcgcagccggagcaaggcgcggagaacgggacgctctcgttttacaccttcgaaagc
atgcccgacgagggcatatgctgcgaggagctggtgctgctgggcgagccggcctccggc
gaacggctggcggcagtgctggagcgatgcaacggactggaagccgtgcacgccatatac
cggcaggaacgcgcttcacccgggcggacccggcgattccccggacgcgagcagtttgcc
aaagtgtatcagctgctccgacgagcggagcggctgcccgagcgaggcttgtccgagcgt
cttgccgcgatggcgggattgcccgccgacaccgtcgaaatgatgctggacgtttttgcc
gaactggcatttatcgaacggcgcgaaggaagcatatatgtgaacccgtcgccgcaaaaa
cgggagctctccgagtcggcccgttaccgggcggcggttcgcgaggcggaatccgcctcc
attctgcatgcgccgtacaaggagctgtccggctggatcgccgaacgttcggcgcgccgt
accggaacgttaaatggcggagcaacgatttcaagtcctgaaaggatgacctga

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