Paenibacillus sp. 32O-W: IJ21_16270
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Entry
IJ21_16270 CDS
T04219
Name
(GenBank) single-stranded DNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03410
Base excision repair
pow03430
Mismatch repair
pow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IJ21_16270
03430 Mismatch repair
IJ21_16270
03440 Homologous recombination
IJ21_16270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_16270
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IJ21_16270
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IJ21_16270
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IJ21_16270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
ssDNA-exonuc_C
DHHA1
LysX_preATP_grasp
Motif
Other DBs
NCBI-ProteinID:
ALS27029
UniProt:
A0A0U2WHQ0
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Position
1818978..1821431
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AA seq
817 aa
AA seq
DB search
MIKPKTRWDVGQWTPVQDERAAKLAAALKLPPLVARLLVARGVDEPEAARLFLEAGPEHM
HDPYRLKGMEEAVERIRRTTADGGKIRIYGDYDADGVSATSLLIRLFRRLGYDFDYYIPD
RLKEGYGLNRPAIDQAAAAGVRLLLTVDTGVSAVDEVAYARELGMEVVVTDHHEPPEVLP
EAHALINPKQPGCPYPFKGLAGAGVAFKLAHALTGEPPLELADVAALGTIADLMPLTGEN
RILVRCGLAQMRGGSVPGLRALAEKANVNLAAVTAADVAFGMAPRVNASGRLSHADHAVT
LLTTERSEEAEEKAALLDGLNRERQKIVDAIVREAEEMWEARCDRARREGETEPPVIVLA
GEGWNVGVIGIVASKLLEKHYKPTVILSVDGETGLCKGSARSIDGYDLHAALTSCAELFE
HFGGHQAAAGMTLHRDRLAELERRLGEWALRTLTDEDWIPKTRVDLVCALEEASVETIEQ
LDRLQPFGADNPSPRVLIANVNVADRRTMGKDGKHLKLSLAGGGRLLDAVGFGMGGYAEQ
LAQGAYVSVIGELAMNEWNGNRRPQLLMKDLRVEQVQLFDLRGEREPLAALRAVLERTAA
RERSAAVLAATQAWAEAAAGAAQPEQGAENGTLSFYTFESMPDEGICCEELVLLGEPASG
ERLAAVLERCNGLEAVHAIYRQERASPGRTRRFPGREQFAKVYQLLRRAERLPERGLSER
LAAMAGLPADTVEMMLDVFAELAFIERREGSIYVNPSPQKRELSESARYRAAVREAESAS
ILHAPYKELSGWIAERSARRTGTLNGGATISSPERMT
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaccgaaaacaaggtgggatgtcggccagtggacgcccgttcaggatgagcgg
gccgcgaagctcgccgccgcgctgaagctgccgccgctcgtcgccagactgctggtggcg
cgaggcgtggacgagccggaggcggcaaggttgtttctcgaggcggggccggagcatatg
cacgacccgtatcggctgaaggggatggaagaagcggtcgagcggattcgcaggacgacg
gcggatggcgggaaaatccgcatttacggcgattacgacgccgacggcgtatcggcgacc
tcgctgctgatccggctgttccggcgcctcggttatgacttcgattattacataccggac
cgcttgaaagaaggatacggtctgaaccggccggccatcgatcaggccgcggccgccggc
gttcgcctgctgctgacggtcgataccggggtgagcgcggtcgatgaagtggcttatgcg
cgcgagctcggcatggaagtcgtcgtcacggaccatcacgaaccgccggaagtgcttccg
gaagcgcatgcgctcattaatccgaagcagccgggatgcccgtatccgttcaaaggactg
gccggcgccggcgtcgccttcaagctcgcccatgcgctgacgggcgagccgccgcttgaa
ctcgccgatgtcgcggcgctcggcacgatcgccgatctgatgccgctcaccggcgaaaac
cgtatcctcgtccgctgcggcctcgcccagatgcggggcggcagcgttccgggcttgcgg
gcgctggccgagaaggcgaatgtgaacctggccgccgtaacggccgccgatgtcgcattc
ggcatggcgccgcgggttaatgcgagcggccggttgtcccatgccgatcatgccgtcacg
ctgctcacgacggagcggtccgaggaagccgaagagaaagcggcgctgctcgacgggctc
aatcgggaaaggcagaaaatcgtcgacgccatcgttcgcgaagcggaggagatgtgggaa
gcgcgctgcgaccgcgcgcggcgcgaaggagagacggagccgccggtcatcgttctcgcc
ggggaaggctggaacgtcggcgtcatcggcattgtggcgtccaagctgctggagaagcac
tacaagccgacggtcatcctctccgtcgatggcgagaccggcttatgcaaaggctccgcc
cgttccatcgacggctatgaccttcatgctgcgcttacttcatgcgccgagctgttcgaa
catttcggcggtcatcaggctgcggccggcatgactcttcatcgcgaccggctggcggag
ctcgaacgccggcttggcgagtgggcgctgcggacgttgacggatgaagactggattccg
aaaacgcgcgtcgatctcgtatgcgctttggaggaagcttcggtcgagacgatcgagcag
ttggacaggcttcagccgttcggcgcggacaatccgtctccgcgcgtcctgatcgcgaac
gtcaatgttgcggacaggagaacgatgggcaaggacggcaagcatctgaagctgtcgctc
gcgggcggcggccggctgcttgacgcggttggtttcggtatgggcgggtatgccgaacag
ctggcccagggcgcatatgtcagcgtaatcggcgaacttgcgatgaacgaatggaacggc
aaccgccgtccgcagctgctgatgaaagatttgcgggtagagcaggtgcagctgttcgat
ctgcgcggggagcgcgagccgcttgccgcgctgcgcgccgttctggaacgaacggccgcg
cgggaacgttcggcggccgtattggcggcgacgcaggcgtgggccgaggcggcggccggc
gccgcgcagccggagcaaggcgcggagaacgggacgctctcgttttacaccttcgaaagc
atgcccgacgagggcatatgctgcgaggagctggtgctgctgggcgagccggcctccggc
gaacggctggcggcagtgctggagcgatgcaacggactggaagccgtgcacgccatatac
cggcaggaacgcgcttcacccgggcggacccggcgattccccggacgcgagcagtttgcc
aaagtgtatcagctgctccgacgagcggagcggctgcccgagcgaggcttgtccgagcgt
cttgccgcgatggcgggattgcccgccgacaccgtcgaaatgatgctggacgtttttgcc
gaactggcatttatcgaacggcgcgaaggaagcatatatgtgaacccgtcgccgcaaaaa
cgggagctctccgagtcggcccgttaccgggcggcggttcgcgaggcggaatccgcctcc
attctgcatgcgccgtacaaggagctgtccggctggatcgccgaacgttcggcgcgccgt
accggaacgttaaatggcggagcaacgatttcaagtcctgaaaggatgacctga
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