Paenibacillus sp. 32O-W: IJ21_18870
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Entry
IJ21_18870 CDS
T04219
Name
(GenBank) subunit C of exonuclease SbcCD
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_18870
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IJ21_18870
Archaeal homologous recombinant proteins
IJ21_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ALS27288
UniProt:
A0A0U2UMS6
LinkDB
All DBs
Position
2102500..2106030
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPIRLKLAGLQSYREAQEIDFERLCEGGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
GGTQGIMNQAEKTLFVAFTFELNGGGRTRRFRVERQFKRSGDVSVGSALCRFIELLPQGE
QVLADKLADVNRCVEEHIGLNMQDFTRAVVLPQGKFAEFLSLTGKERRSMLQRLFRLERY
GDGLAARLQQRVRAAESALAEAAAEQQGLGDASAEAVAAAEARCREAAREAEQARRALAE
AERVYAEQQEVRARQEALRAKEALQAKLLEDAPKVEALEAELRRLAAAERLMPALDARDA
AEAQLRALAARREEAGRTHAARQEAAAAAAAAWTAASAAAAEAEPRLALRLDQLAQALRL
EEEAAKLARAIEDGERRHADAVERQRRYGEQAAQTNEKLARGTARQSELKAALQAVELKP
HERQQRLLLSRRLQERQTLAAQLSAAREELAAQEKAAAEAADNCRQAEAALERERRELAA
AEREVSPVAAALGELEDGLRRLAAAAETALQRERQRERELERGRLAAQLAAELADGAPCP
VCGSCSHPALHGQSAPNAQPAATAGAADAAAAIEGGAAAWERLLRRMQEALLALAPVRHR
ADEWLAKLREAADGLHGEPLRSADDAAGRAVRDLLGAWPAEAAAAVAATPQAPGAMPEFA
GAPGLAEASAALEAAEERRRTCELQLGRFGQQLTAALKRLNEARSRAETAAAELRALERP
LAAVRRRAEEAQAAMAADDGRWAAEFPGLPPEKAEETLADWERRDKETDDLKERLERSVT
FLEEHRQLLAELQEAERQAQLEAVQAAAALEGDRRLAADQRERLAAWTGGRPAAELIAAA
ERELKSLRERLQAAQREHEAAQAALQQSAERRAAAEEAEQTAAERLAAASAHWDELLAGS
EFESAEAVASLRGLLPQKEAMEAAIARHREAEKQLAAQVELLREQLGGRSVTDEEWSACV
EAWTAAKRASEEKLQAEARAQRDRDELAGKHERWTELEEKRRGLQELQGRLAKLQSVFRG
NAFVEYIAEEQLVQVCRVASERLGYLTKRRYALEVDSGGGFVIRDDANGGIRRPVSTLSG
GETFLASLSLALALSAQIQLRGRHPLQFFFLDEGFGTLDPELLETVIAALEKLHTSELAV
GVISHVPELRARLPRRLIVTPAEPSGAGSRVAIETM
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatcaggctgaagctggcggggctgcaaagctaccgtgaagcgcaggagatc
gatttcgagcggctgtgcgagggcggagtgttcggcatcttcggaccgacgggcagcggc
aaatcgagcattctggacgcgatgacgctggcgctttacggcaaggtggagcgcgccgcc
ggcggtacgcagggcattatgaaccaggcggaaaaaacgctcttcgtcgcgttcacgttc
gagctgaacggcggcggacggacgcggcgcttccgggtggagcggcagttcaagcggagc
ggcgacgtttcggtcggcagcgcgctctgccgctttatcgagctgctgccgcagggcgag
caggtgctggcggataagctggccgacgtcaaccgctgcgtggaagagcatatcggcttg
aacatgcaggatttcacgcgcgccgtcgtgctgccgcaaggcaagtttgcggagtttctg
tcgctcacgggcaaggagcgccggtcgatgctgcagcggctgttccggctggagcgttac
ggcgacgggctggccgcgcgcctgcagcagcgggtcagagccgccgagtcggcgctggcc
gaagcggccgcggagcagcaagggctcggcgacgcctcggccgaggcggttgccgcggcc
gaggcacgctgccgcgaagccgcgcgcgaagcggagcaggcgcggcgcgcgctcgcggaa
gcggagcgggtgtacgcggagcagcaggaggtgcgcgcgcggcaggaagcgctgcgcgcc
aaggaggcgctgcaggcgaagctgctcgaagacgcgccgaaggtggaggcgctcgaggcg
gagctgcggcgccttgcggcggccgagcgcctgatgccggcgctcgacgcccgcgacgcg
gccgaagcgcagctgcgcgcgcttgcggcgcgccgcgaggaggccgggcggacgcatgcc
gcccggcaggaagcggccgcggcggccgccgctgcatggaccgcggcgagcgccgccgcg
gctgaggccgagccgcgcctggcgctgcggctcgaccagctcgcgcaagcgctgcggctc
gaggaagaagccgccaagcttgcgcgagcgatcgaggacggcgagcgccgccatgcggac
gccgtcgaacggcagcggcgttatggcgagcaggccgcccaaacgaacgagaagctcgct
cgcggcacggcgcggcagagcgagctgaaagcggcgctgcaggcagtcgagcttaagccg
cacgagcgccagcagcgcctgctgttgtcgcgccgcctgcaggagcggcagacgctggcg
gcacagctgtccgccgcccgggaagagctggccgcgcaggaaaaggccgccgccgaagcg
gcggacaactgccgccaggccgaagcggcgctcgagcgcgagcggcgggagctggccgcg
gccgaacgggaggtttcgccggttgcggcggcgctcggcgaactggaagacggcttgcgt
cgtcttgcggccgcagccgagacggcgcttcagcgggaaaggcagcgggagcgggagctg
gagcgcgggcggcttgccgcgcagcttgcggcggagctggctgacggagcgccctgcccc
gtatgcggctcctgcagccatccggcgctgcacggccaatcggcgccgaacgcgcagccg
gctgccaccgccggtgctgccgacgccgcagccgcgatcgagggcggcgctgccgcttgg
gagcggctgctgcggcggatgcaggaagcgctcctcgcgcttgcgcctgtccggcaccgc
gcagacgaatggctggccaagctgcgcgaagcggcagacggcctgcatggcgaaccgctg
cgttccgccgacgatgcggccggccgcgcggtccgcgacttgctcggcgcatggccggct
gaagcggccgccgcggtcgccgcgactccgcaggcgcccggagcgatgccggaattcgcc
ggagcgcccggacttgccgaagcttccgcggcgctggaggcggcggaggagcggcgccgg
acgtgcgagctgcagctcgggcgcttcgggcagcagctgaccgccgccttgaaaaggttg
aacgaggcgcgaagccgtgccgagactgcggccgccgagctaagggcgctggagcgcccg
ctagcggcggtgcgacgcagggcggaggaagcgcaagcggcaatggcggcggatgacggg
cggtgggccgcagagtttcccggcctgccgccggagaaggcggaggagacgctcgcagac
tgggagcgccgcgacaaagaaacggacgatttgaaggagcggctcgaacggagcgtcacc
tttctggaagagcaccggcagttgcttgccgagctgcaggaggcggagcggcaggcgcag
ctggaagccgtgcaggcggccgccgcgttggagggcgaccgccggctggcggcggatcag
cgcgaacggctggcggcatggaccggcggccgtcccgccgccgagctgattgccgcagcc
gagcgcgagctgaagtcgctgcgcgaacggctgcaggccgcacagcgcgagcatgaggcg
gcccaggccgccctgcagcagagcgccgagcgtcgggctgcggcggaagaagccgagcag
accgccgccgaacggctggccgcggcttccgcgcattgggatgaactgcttgccggttcg
gaatttgagagcgccgaagccgttgcgtcgctgcgcgggctgctgccgcagaaggaagcg
atggaagctgcgatcgcccggcatcgcgaggccgagaagcagctggcggctcaggtggag
ctgctccgcgagcagctcggcggtcgctcggtgacggacgaagaatggagcgcttgcgtt
gaagcctggaccgccgcgaagcgggcgagcgaagagaagctgcaggcggaagcaagggcg
cagcgcgatcgggacgaactggccggcaagcacgagcgctggacggagctcgaggagaag
cggcgcgggctgcaggagctgcagggccgtctcgccaagctgcagtccgtcttccggggc
aatgcgtttgtggaatacatagccgaggagcagctcgtccaggtatgccgcgtcgcatcg
gagcgtctcggctacttgacgaagcggagatacgcgctggaggttgattccggcggcggc
ttcgtcatccgcgacgacgcgaacggcggcatccgcaggccggtgtcgacgctttccggc
ggggaaaccttccttgcctcgctttcgctcgcactcgcgctatcggcgcaaattcagctg
cgcgggcggcatccgctgcaattcttttttctggacgaaggattcggcacgctcgatccg
gaattgctggagacggtcattgccgcgctggaaaagctgcacacgagcgaactggccgtc
ggcgtcatcagccatgtgccggagctgagggcccggctgccgagacggctgatcgttacg
cctgcggagccgtcgggggcgggcagccgcgtcgcgatcgaaacgatgtga
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