Paenibacillus sp. 32O-W: IJ21_20540
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Entry
IJ21_20540 CDS
T04219
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
IJ21_20540
09124 Replication and repair
03420 Nucleotide excision repair
IJ21_20540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pow03021
]
IJ21_20540
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_20540
Enzymes [BR:
pow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IJ21_20540
Transcription machinery [BR:
pow03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
IJ21_20540
DNA repair and recombination proteins [BR:
pow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
IJ21_20540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
HTH_upst_double_PIN
Motif
Other DBs
NCBI-ProteinID:
ALS27451
UniProt:
A0A0U2IPT1
LinkDB
All DBs
Position
2276967..2278673
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AA seq
568 aa
AA seq
DB search
MLRKKDGPLIVQSDFSVLLDDSHPLAEEAREKLAGFAELIKRPGVMHTYRITPLSIWNAA
ASGTTAEEMVGTLTAYGRYGLPRQIEEAVRRLADRYGRLVLRRNGDGTLLLEGPEELFRE
LAESPEWAGRLDGRTAAGWTVPPEQRGAIKRELVRAGYPVVDLAGYHAGESLAVALRQGD
GGFALRDYQARALDLFYRDQDNSGGSGVIVLPCGSGKTVIGVGAIARLRSATLILTSNAT
SVRQWKRELLDKTTLTDGDIGEYCGARREVRPVTIATYQMMTQRKGKGNEFPHMQLFRQR
DWGLIVYDEVHLLPAPVFRMTAEIQATRRLGLTATLIREDGCAEDVFSLIGPKLFEMPWK
MLESKGWIASVRCCEIRLPLPEAERPRYYAADARTKVRLAGENAGKLPIVEELLRWHAGQ
PALVIGQYLDQLHRLGAKLNAPVLTGEVRQEERERLYEAFKRGEIPVLVVSKVANFAVDL
PDAAVAIQVSGSFGSRQEEAQRIGRILRPKTGGNAAWFYTLVTAQSKETEFAAKRQLFML
EQGYRYELVRLAEGSGEPMGAFKEAGGR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgcaaaaaggacgggccgctgatcgtacagtccgatttctccgtgctgctcgac
gattcgcatccgcttgcggaagaagcgagagagaagcttgcaggcttcgcggagctgatc
aagcggccgggggttatgcatacttaccggataacgccgctgtcgatatggaacgccgcc
gcgtcgggcacgacggcggaggaaatggtcggaacgctgaccgcttacggccgttacggc
ttgccgcgtcagatcgaggaagcggtgcgccggctggcggatcgttacggccgccttgtg
ctgcggcggaacggagacgggacgctgctgctcgaaggaccggaggagctgttccgggag
ctggccgaatcgccggaatgggccggccggcttgacggcagaacggccgccggctggacc
gtcccgcccgaacagcgcggcgcgatcaagcgggagttggtgcgggccggttatcccgtc
gtcgatctggccggttatcatgccggcgaatcgctcgcggtcgccctccggcagggtgac
ggcggtttcgctttgcgggactaccaggcacgggcgctcgacttgttttatcgcgatcag
gataacagcggcggaagcggggttatcgtcctgccgtgcggatcgggaaaaaccgtcatc
ggggtcggcgcgatagcccggctgcgcagcgcgacgctcatcctgacgtcgaatgcgaca
tcggtccggcagtggaagcgcgagctgctggacaaaacgacgctgaccgacggggatatc
ggcgaatattgcggagcgcgcagagaagtgcggccggttacgatcgccacttatcagatg
atgacccagcgcaaaggaaaagggaacgagttcccgcatatgcagctgtttcgccagcgg
gactgggggctgatcgtttacgacgaggtccatctgctgccggcccccgtctttcggatg
acggcggaaattcaggcgacgcggcggctcggactgaccgccacccttattcgcgaggac
ggctgcgccgaagacgtgttttcgctgatcggaccgaaactattcgagatgccgtggaaa
atgctcgagtccaaaggctggatcgcatcggtcagatgctgtgaaatccggctgccgctg
ccggaagccgagcgtccccgctattatgccgccgatgcgcgcacgaaggtccggctcgca
ggcgaaaacgccggcaagctgccgatcgtggaggagctgctgcggtggcatgccgggcag
ccggcgctcgtcatcggccagtatttggatcagctgcaccggcttggcgcgaagctgaac
gcgccggtactgaccggcgaagtgcggcaggaggagcgggaacggctgtacgaggcgttc
aagcgcggcgaaatcccggtgctggtcgtctccaaggtggcgaatttcgccgtcgacttg
cccgatgcggcggttgcgatccaggtgtcgggcagcttcggctcccgccaggaggaggcg
cagcggatcgggcgcattctccgcccgaaaaccggaggcaatgcggcgtggttctacacg
ctcgtaaccgcccagtcgaaggagacggaatttgccgccaagcgtcagctgttcatgctg
gagcaggggtaccgctacgagcttgtccgcctggcggaaggaagcggcgagccgatgggg
gcattcaaggaggcgggaggacgatga
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