Paenibacillus sp. 32O-W: IJ21_21400
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Entry
IJ21_21400 CDS
T04219
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pow03032
]
IJ21_21400
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_21400
Enzymes [BR:
pow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IJ21_21400
DNA replication proteins [BR:
pow03032
]
Prokaryotic type
DNA Topoisomerases
IJ21_21400
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IJ21_21400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Auto_anti-p27
DUF7340
Toprim_3
IBR_1
Motif
Other DBs
NCBI-ProteinID:
ALS27537
UniProt:
A0A0U2V0R5
LinkDB
All DBs
Position
2367213..2369303
Genome browser
AA seq
696 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEIENDFQPKYITIRGK
GSVLKELKDARKKVKRVYLAADPDREGEAIAWHLAHYLELEEGENCRVVFNEITKQAVKD
AFKQPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVTVKLIIDREN
EIDAFVPVEYWSITAAMKLGDAAFEAKFYAVGGEKRELGNEQDVQEVLRALEGRPFVVTD
VKEKERLRHPAPPFITSSLQQEAARKLGFRTSKTMSVAQQLYEGVDLGKEGSVGLITYMR
TDSTRISPVAQEEARAYIGEKYGAAYVPEQPRVYTKKNANTQDAHEAIRPTSVLREPETV
KEYMTRDQFRLYKLIWERFVASQMSSAVLDTMTVDLTAGDVTFRAVGSKIKFHGFMKVYV
EGNDDGTEEDDKFLPPLKQGDEVAVSSIEPKQHFTQPPPRYTEARLIRTLEELGIGRPGT
YSPTLETIQKRGYVALEDKKFVPTELGELVIQLMEQFFPEILDVEFTAHMEDDLDHIEEG
KVDWVKVLSSFYKSFEKRLEVAEDEMKEVEIQDEVSDEVCDKCGRPMVYKMGRFGKFLAC
SGFPDCRNTKPIVKEIGVACPQCHEGRVIERRSKKGRIFYGCDRYPACEYVSWDKPAGKP
CPTCETMLVEKRNRSGTRLQCPQCGYTEELPDSEQA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattcacttgtcatcgtcgaatctccggcgaaagccaagacgataggcaaatat
ctgggcagcaaatatatcgtgaaagcctccatgggacatattcgcgatttgccgaagagc
cagatcggcgtcgagatcgagaacgatttccagccgaaatatataacgatccgcggcaaa
ggcagcgtcctgaaggaactgaaggatgcaagaaaaaaagtcaagcgcgtctatctcgcg
gcggaccccgaccgcgagggcgaagcgatcgcctggcatctggcccattacctggagttg
gaggaaggcgaaaactgccgcgtcgtgtttaacgaaattacgaagcaggcggtcaaggac
gcattcaagcagccgcgcaaaatcaatatggatctggtgaacgcgcagcaggcgcggcgc
atactggaccggctggtcggctacaagatcagcccgcttctgtggaagaaagtgaagaag
gggctgtccgccggccgcgtacaatccgttaccgtcaagctcattatcgatcgcgagaac
gagatcgatgctttcgtgccggtcgaatattggtcgatcacggcggcgatgaagctcggc
gacgccgctttcgaggccaaattttacgccgtcggcggcgagaaacgggagctcggcaac
gagcaggacgttcaggaagtgctgcgggcgctggaagggcgtccgttcgtcgtaacggat
gtgaaggagaaggaacgtctgcgccatcccgcgccgcctttcatcacaagctcgctgcag
caggaagcggcgcgcaagctcggcttccggacgtcgaagacgatgtcggtggcgcagcag
ctgtacgaaggcgtcgatttgggcaaggaaggctctgtcggtctcattacatatatgagg
accgactccacccgcatttctcccgttgcgcaggaagaagcgcgcgcctatatcggagaa
aaatacggcgccgcatatgtgccggaacagccgagggtctatacgaagaaaaacgcgaat
acccaggatgcccatgaggcgatccgcccgacctccgtcctgcgcgaaccggaaacggta
aaggaatatatgacccgcgaccagttcaggctgtacaaattgatctgggaacggttcgtg
gcaagccagatgtcttccgccgtgctcgacacgatgaccgtcgatctgacggccggcgac
gttacgttccgcgcggtcggctccaaaatcaaattccacggtttcatgaaagtatacgtg
gagggcaacgacgacggaacggaggaagacgacaagtttctgcccccgctcaagcaaggc
gacgaagtggccgtcagctcgatcgagccgaagcagcattttacgcagccgccgccgcgc
tataccgaggcgcgcctgatccgaacgctcgaggagctcggcatcggtcggccgggcacc
tattcgccgacgctggagacgatccagaagcgggggtatgtggcgctcgaggacaagaaa
ttcgtcccgaccgagctcggcgagctcgtcattcagcttatggaacaattttttccggaa
attctcgacgtggaatttaccgcccatatggaagacgatctcgaccatatcgaagaaggc
aaggtcgattgggtcaaggtgctttcttccttctacaagtcgttcgagaagcggctggaa
gtggccgaggacgagatgaaggaagtcgaaatccaggacgaggtttcggatgaagtatgc
gacaagtgcggccgcccgatggtttacaagatgggacgcttcgggaaatttctggcttgt
tccggatttccggactgccgcaacacgaaaccgatcgtcaaggaaatcggcgtcgcctgt
ccgcaatgccatgaaggccgcgtcatcgagcgccgcagcaagaaagggcgcatcttctac
ggatgcgaccgttatccggcatgcgaatacgtctcatgggacaaaccggcgggcaagccg
tgtccgacatgcgaaacgatgcttgtcgagaagcgcaaccgcagcggaacccggctgcaa
tgcccgcagtgcggctatacggaagaactgcccgatagcgagcaggcgtaa
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