KEGG   Paenibacillus sp. 32O-W: IJ21_22110
Entry
IJ21_22110        CDS       T04219                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pow  Paenibacillus sp. 32O-W
Pathway
pow03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pow00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IJ21_22110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pow03019]
    IJ21_22110
Messenger RNA biogenesis [BR:pow03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IJ21_22110
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 AP_endonuc_2
Other DBs
NCBI-ProteinID: ALS27608
LinkDB
Position
2437497..2439176
AA seq 559 aa
MSKKNNQDKLLIFALGGVGEIGKNMYVVQYGNDIVVVDAGLKFPEEDMLGIDIVIPDITY
LTDNRDKVRGILLTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLVEGKLKEAGLLGETKR
ILINADSEVQLGSIRASFFKTNHSIPDSVGVCLDTPEGIVVHTGDFKFDHTPVNDQFADL
QRIAEIGKRGVLALLSDSTNAERPGFTPSESNIGNELEAIFRKATQRIVIATFASNVHRI
QQVFNAAMATRRKIAVVGRSMVNVVTIASELGYLNIPEGMLIEPEEVNKMAADRVVVLCT
GSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPIPGNERYVGRTVDELFRLGANVIYG
PGSVSRVHVSGHGSQEELKLMLNLIRPKYFIPIHGEYRMLHHHAKLGESIGIEKDNIFII
DNGDTVEFQGGVARKSGKVPAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ
DGKILSGPDIISRGFVYVRESEGLLDEANRIVTSTLNKLMNDNVNEWASLKTNVKEALGR
FLYEQTRRRPMILPIIMEV
NT seq 1680 nt   +upstreamnt  +downstreamnt
ttgtcaaagaagaacaaccaggataagctgcttatttttgcgctgggtggcgttggcgaa
atcggaaaaaatatgtacgtcgtacaatatggaaacgatatcgtcgtcgtcgatgccggc
ctgaaattcccggaggaggatatgcttggcatcgatatcgtcattccggacattacgtac
ttgaccgacaatcgagacaaagtacggggaattttgcttacgcacggacatgaggatcat
atcggcggactgccgtacgtgctgaaacatttgaacgttccggtatacggtacgaaattg
acgctcggacttgtagaaggaaagctgaaggaagccggtcttctcggcgaaacgaagcgc
attctgatcaacgccgactcggaagtgcagctcggctcgattcgcgcgtcgtttttcaaa
acgaatcacagcattccggattctgtcggggtttgcctcgatacgccggaaggaattgtc
gttcatacgggtgacttcaagttcgaccatacgcccgtcaacgatcaattcgccgacctt
cagcgtatcgcggaaatcggcaagcgcggcgttctcgcgctgctgtcggacagcacgaat
gcggaacgcccgggctttacgccgtcggaaagcaatatcggaaacgaattggaagcgata
ttccgcaaagcgacgcagcgcatcgtcatcgcgacattcgcttcgaacgtgcaccgcatt
caacaagtcttcaatgccgcgatggcgacccgccgcaaaatcgccgtcgtcggccgaagc
atggtcaatgtcgtcactatcgcttccgagctcggctatttgaacattccggaaggcatg
ctgatcgagcccgaagaagtgaacaagatggcggcggaccgcgtcgtcgtgctttgcacg
ggcagtcagggcgagccgatgtcggcgctcacccgcatggcccgctcgacgcaccgcaag
gtggatattttgcccggggatacggtcattattgccgcaacgccgattcccggcaacgaa
cgttacgtcggcagaacggtcgacgaattgttccggcttggcgcaaacgtgatttacgga
cccggttccgtatcgcgtgtacacgtttccggtcacggcagccaagaggaactgaagctt
atgctgaacctgattcgtccgaaatatttcatcccgattcacggggaataccggatgctg
catcatcacgccaagctgggcgaatcgatcggcatcgagaaagacaacattttcattatc
gacaacggcgacacggttgaattccagggaggcgttgcgcgcaaaagcggcaaagtgcct
gccggcaacgtgctgatcgacggacttggcgtcggcgacgtcggcaacatcgtgcttcgg
gaccgcaagctgctgtcccaggacggcattctcgtcgtcgtcgtcacgctcagcaagcag
gacggcaaaattttgtccggtccggacattatttcccgcggcttcgtctatgtaagggag
tcggaaggactgcttgacgaagcgaatcgcatcgtcacgtcgacgctgaacaagctgatg
aacgacaatgtcaacgaatgggcttcgctcaagacgaacgtcaaggaggcgctcggacgt
tttctgtacgagcagacgcggcgccgcccgatgattttgcccattattatggaagtgtaa

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