Paenibacillus sp. 32O-W: IJ21_22790
Help
Entry
IJ21_22790 CDS
T04219
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pow03019
]
IJ21_22790
Enzymes [BR:
pow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IJ21_22790
Messenger RNA biogenesis [BR:
pow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IJ21_22790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
Motif
Other DBs
NCBI-ProteinID:
ALS27676
UniProt:
A0A0U2UXK1
LinkDB
All DBs
Position
2521221..2523827
Genome browser
AA seq
868 aa
AA seq
DB search
MNRLPIDDVWPDLRDALRAGPNAVLVAPPGSGKTTRVPLVMLDEPWLGGRRVLLLEPRRL
AARSAAAYMARSLGEQTGETVGYRVRLDTRVGPGTRIEVVTEGVLTRMLQEDPALEGVGA
VLFDEFHERSLHADLGLALCLEAQSLLRSDLRLVVMSATLEAEPVARLLGDAPVIASDGR
AFPVETIYLGRSAERTAEFGPHFRAGRAGALERDVAAAVMRALTEREGDILVFLPGAGEI
RRTEALLSAERLPSSVEVMPLYGSLPAERQDAAIAPAAAGRRKIVLSTSIAESSLTVEGV
RVVIDAGLMRVPRFSPRTGMSRLETVPVSQASADQRKGRAGRVAPGTVYRLWSERDHALL
PEARTPELLEADLAQLALELAVWGVSDPERLQWLDPPPRGAFAQARELLRRLGALDADGR
ATAHGRRMAELGTHPRLAHCILRAHSLGWADAACELAALLGDRDLLHGERNADMRLRVDA
LRRAARTGSPPQGADPAAVRRLLAEARELRRAADRIVGAEGAASGGSAAAAGPGAPAAGA
AAHGADDAPVGLLLAFAFPDRIAQRRPDGRYLLANGRGAVLPGTQPLSRAEYIVAAELDD
SGTESRILLAAEVSAADLERYCAESIAAEESVEWDSEARAVRPLRRIRLGAIVLKEGRLA
HPDPESVRKALIRGLQEAGLEALPWTKTARQLLARMRMMSRFGGDWPDVSEEALLSRLDE
WLGPYIEGATKLQDVLKVALADALEGMLTWRQRQELDREAPTHITVPSGSRIPIDYSDPE
SPVLAVRLQELFGLKETPKLANGRLPLTLHLLSPAHRPVQVTRDLSSFWSEAYFEVRKEL
RSRYPKHVWPDDPLTAAPTNRAKPRGNH
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgattaccgatcgacgatgtatggccggatttgcgggatgcgctgcgggcgggg
ccgaacgcggtactcgtggcgccgccgggatcgggcaagactacgcgggtgccgcttgtg
atgctggacgagccgtggcttggcggccgccgcgttttgctgctggagccgagaaggctc
gccgccaggtcggccgccgcttatatggccaggtctcttggcgagcaaacgggcgaaacg
gtcggttaccgggtgaggctcgatacgcgggtcggacccggtacgcgcatcgaggtcgtc
accgagggcgtgctgacgcgcatgcttcaggaggaccccgcgctcgaaggagtcggagcg
gtgctgttcgacgagtttcacgagcggagcctgcatgcggatctcggtctggcgctctgc
ctggaggcgcaatcgctgctccggagcgatctgcgtcttgtcgtcatgtcggcgacgctc
gaagcggaaccggtcgccagactgcttggcgatgcgccggttattgcaagcgacggccgc
gcctttccggtcgagacgatctatctggggcgatcggccgaacggacagcggaattcgga
ccgcacttccgggccggccgtgccggtgcgctggaacgcgacgtcgcggccgccgtgatg
agggcgctcacggaacgcgaaggcgatattctcgtctttctgccgggcgccggcgaaatt
cggcggacggaggcgctgctctcggcggagcggctgccctcctccgtcgaggtgatgccc
ctgtacggcagcttgcctgccgaacggcaggatgcggcaatcgcgccggcggcggccggc
cggcgcaaaattgtgttgtcgacctcgatagccgagtcgagtctgaccgtggaaggggta
cgcgtcgtgatcgatgcgggactgatgcgggtgccgcgattttcgccgcgcacgggcatg
tcgcggctggagaccgttccggtgtcgcaggcgtccgccgaccagcgcaaaggccgggca
ggccgcgtagcccccggaacggtgtaccggctatggtcggaacgcgaccatgcgctgctg
ccggaggcgcgtacgcccgagctgcttgaagcggatctggcccagctggcgctggagctt
gccgtatggggcgtatcggacccggagcggcttcaatggctcgatccgccgccgcgcggc
gctttcgcgcaggcgcgggagctgctccgccggttgggtgcgcttgacgccgacggccgg
gcaaccgcgcacggccgccggatggccgagctcggcacccatccccgtcttgcgcattgc
atactgcgcgcccattcgctcggatgggcggacgccgcctgcgagctcgcggcgctgctc
ggcgaccgcgatctgctgcacggcgaacgaaacgccgacatgcgactgcgcgtcgacgcg
ctccgccgcgcggcgcgcaccggcagtccgccgcagggagccgatcccgccgccgtcaga
cggctgttggccgaagcgcgcgagctgcgccgggcagcggatcgcatcgtcggggcggaa
ggcgcggcaagcggcgggtccgccgctgctgccggccccggagcgccggccgccggcgcg
gccgcgcatggcgccgatgacgcgccggtcggattgctgctggctttcgcatttcccgac
cggatcgcgcagcggcggcctgacggccggtatttgctcgcgaacgggcgaggggccgtg
ctgccgggcacgcagccgttatcgcgggccgaatatatcgtcgccgccgagttggacgat
agcggcacggaaagccgcatactgctggcggcggaggtatcggctgcggatctggaacgg
tattgcgccgaatcgatcgcggcggaggaaagcgtggaatgggacagcgaagcccgtgcg
gtaaggccgctcaggcgtatccggctgggagcgattgtcctgaaggaaggtcgtcttgcg
catcccgatcccgaatcggttcggaaggcgcttattcgcggattgcaggaagcgggactc
gaagcgctgccgtggacgaagacggcgcggcagctgctggcccgcatgcggatgatgagc
cgcttcggcggcgattggccggacgtatccgaggaggcgcttctttcgcggctggacgag
tggctcggtccgtatatcgaaggggcgaccaagctgcaggatgtgctgaaggttgcgctc
gccgacgctttagaagggatgctgacctggcgccagcggcaagagctggaccgcgaagcg
cctacgcatattaccgtgccgagcggctcgcgcattccgatcgattacagcgatcccgaa
tcgccggtattggcggtccggttgcaagagctgttcggcctgaaggaaacgccgaagctg
gccaacggacgcctgccgctgacgctgcacctgttgtcgcccgcgcatcgtccggtgcaa
gtgacgcgggatttgtccagcttctggagcgaagcgtatttcgaagtaaggaaagaattg
agaagccgctatccgaagcatgtatggcccgacgatccgttgacggcggcgccgacgaac
cgggccaagccgcgcgggaaccattga
DBGET
integrated database retrieval system
