Paenibacillus sp. 32O-W: IJ21_22990
Help
Entry
IJ21_22990 CDS
T04219
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03420
Nucleotide excision repair
pow03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IJ21_22990
03430 Mismatch repair
IJ21_22990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_22990
Enzymes [BR:
pow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IJ21_22990
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IJ21_22990
MMR (mismatch excision repair)
Other MMR factors
IJ21_22990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
AAA_19
UvrD_C
Viral_helicase1
AAA_16
SLFN-g3_helicase
PhoH
AAA_22
AAA_30
ResIII
DEAD
SAM_5
NACHT
FAD-oxidase_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALS27696
UniProt:
A0A0U2ME68
LinkDB
All DBs
Position
complement(2546541..2548904)
Genome browser
AA seq
787 aa
AA seq
DB search
MSVTDQERLHEQRRVDDVREKLRRGIERDEPIVSGLRSQVVEMRKNFWDDVTVNLSTGDD
ILETAISMKQQAEVLSERERSHRHLQARLNRMKRLYPSPYFGRIDFREDGEAEAERIYIG
IASFEDEDDGTYLIYDWRTPVASLYYDYAPGPVQYETPAGTIGGTMELKRQFQIRDGVIR
ALFDTGITIGDELLQQVLGKGAESRMQSIVATIQQEQNRIIRNDRSRMLIVQGAAGSGKT
SAALQRVAYLLYKHRERLTADQMVLFSPNPLFNSYVSSVLPELGEENMQQTTFQEYLEHR
LGDVFRLEDPYDQMEYMLTARHEPDYEARMAGIRYKASERFLAAVQSFGKRLLAGGMAFR
SIRFQGRTLVSAEEMERQFYSYDPAIRLANRVHLLKEWLLQRLNELEKAERSADWVTEEM
NYLDNEQYQLAYNQLRKRQKGKDPAFDDAVQEEELIRAYLVKERFKPLRRSVKRLRFADV
TSLYRQLLNDPETAADFEAFDHGAGTWPQIAEASIRRLDAGELAYEDATPYLYLKELVEG
FQTNNTIRYVLIDEAQDYSPFQFEFLKRLFPRSRMTALGDFNQAIFTHAVELASGDTPIA
RLFGEAETERITLRRSYRSTREIVEFTRQMLPDGHEIEPFDRSGGLPAVVFAANEQARIE
AIASDMADLLAEGFGSVAVICKTAAESAAAYEALKNVCPHLTLVDKHTASFEQGTVVIPS
YLAKGVEFDAVLIYDASAETYGAESERKLFYTACTRAMHRLRLYAVGEPTPFLAGVSPSS
YSVVERP
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttacggatcaggaacggttgcacgaacagcgccgcgtcgacgatgtcagggag
aagctgcggcgcggcattgaacgggacgaacccatcgtgtccggactgcggagccaggtc
gtcgaaatgcgcaaaaatttttgggacgacgtcaccgtcaacctgtcgacaggcgacgat
atactcgaaacggcgatcagcatgaagcagcaggcggaagtgctttccgagcgcgagcgc
agccaccggcatttgcaggccagattgaacaggatgaagcggctttatccttcgccttat
ttcgggcggatcgatttcagggaagacggcgaagcagaggccgaacggatctatatcggc
atcgcttcattcgaggacgaggacgatggaacatacctcatatacgattggcgcacgccg
gttgcgagcctgtattacgattatgcgcccggtccggtacagtacgagacgcctgcaggc
acgatcggcggcacgatggagctgaagcggcagtttcaaattcgcgacggcgtcattcgc
gcgctgttcgacaccggcattacgatcggcgacgagctgctgcagcaggtgctgggcaaa
ggcgccgaatcgcgcatgcagtcgatcgtagcgaccatacagcaggagcaaaaccggatt
atccgcaacgaccgttcccgcatgctgatcgtacagggagctgcgggaagcggcaaaaca
tcggccgcgctgcagcgcgtcgcgtacttgctctacaagcatcgcgagcggctgacagcc
gaccagatggtgctgttctcgcccaatccgctgttcaacagctacgtctcctccgttctt
ccggagctgggcgaagaaaatatgcagcagacgacattccaggaatatctggagcatcgt
ctcggcgacgtcttccggctggaagacccttacgatcagatggagtacatgctgaccgcc
cggcatgaaccggattacgaggcgcgaatggcgggcatccgctacaaggcgtcggagcgg
ttccttgcagccgtgcaatcgttcgggaaacgccttcttgcgggcggcatggcgttccgc
agcatccgttttcaagggcgcacgctcgtatccgccgaagaaatggaacggcagttttac
agctacgatccggcgatccggcttgcgaaccgggttcatctgctcaaggaatggctgctg
caacgactgaatgaactggagaaggcggaacggtcggccgactgggtaaccgaagaaatg
aattacctcgacaacgagcagtaccagctagcttacaaccagctgcgcaaacggcaaaaa
ggcaaggacccggccttcgacgacgccgttcaggaggaggagctgattcgcgcctatctg
gtaaaggaacgtttcaagccgcttcggcgaagcgtgaagcggctccggtttgccgacgtc
acgtccctctaccgtcaattgctgaacgatcctgagacggcagccgatttcgaggcgttt
gatcacggggccggcacatggccgcaaatcgccgaagcatcgatccggcggctcgatgcc
ggcgagctggcgtacgaggacgcgacgccgtatctgtatttgaaggaactggtcgaagga
ttccagacgaacaatacgatccgttacgtgctgatcgacgaagcgcaggactattcgccg
tttcaattcgagtttttgaaacggctgttcccgcgcagccgaatgacggcgctcggcgat
tttaaccaggcgatcttcacccatgccgtggagctggcaagcggggacacgccgatcgcg
cgtctgttcggcgaagccgaaacggagcggatcacgctgcggcgcagctaccgttcgacc
cgggaaatcgttgaatttacgcggcagatgctgccggacggccacgaaatcgagccgttc
gaccggagcgggggcttgccggccgtcgtattcgcagcgaacgaacaagcgcggatcgaa
gcgatcgccagcgatatggcggatctgctggccgagggtttcggatctgtcgccgtcatt
tgcaagacggcagcggagagcgctgcggcctacgaagcgctgaagaacgtttgcccgcat
ctgacgctggtcgacaagcataccgcctcgttcgagcaaggaacggtcgtcattccgtcc
tatttggccaaaggggtggaattcgacgcggtgctcatctacgacgcgtcggcggagaca
tacggagcggaaagcgaacgcaagctgttctataccgcctgcacccgggcgatgcaccgt
ctgcgcctgtatgccgtcggcgaaccgactccgtttctggccggcgtctcgccgtcatcc
tacagcgtcgtcgaacggccataa
DBGET
integrated database retrieval system
