Paenibacillus sp. 32O-W: IJ21_23260
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Entry
IJ21_23260 CDS
T04219
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pow03009
]
IJ21_23260
Enzymes [BR:
pow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
IJ21_23260
Ribosome biogenesis [BR:
pow03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IJ21_23260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DDRD
S4_2
Motif
Other DBs
NCBI-ProteinID:
ALS27723
LinkDB
All DBs
Position
2570610..2571359
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AA seq
249 aa
AA seq
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MKRLERLQKILAQAGVASRRKCEELIVAGQVEVNGEKVTELGAKADPATDVITVNGKPIR
AEKKLYLMLNKPKGVITSANDPQGRKVVTDFLHGIQERVYPVGRLDYDTEGLLLLTNDGE
LANLLTHPRHHVPRTYLATVKGIPHGTSLEKLQKGIELEDGVTAPAEVEYYDVDTEKNEA
TITITITEGRNRQVRRMFEAIRHPVRKLKRIKFGDLTLQSLPRGKYRHLTQQEVQDLRNL
AAQTHKVHK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgattggaacgacttcagaaaatattggcccaggccggtgtggcctcccggcgc
aaatgcgaggaattgattgtggccggccaggtggaagtaaacggcgaaaaggtgacggag
ctcggcgcgaaagccgacccggcgacggacgtcattacggtgaacggaaagccgattcgc
gcggaaaagaaactgtatctgatgctgaacaagccgaaaggcgtcattacgagcgccaac
gatccgcaaggccgcaaggtcgtcacggactttttgcacggaattcaggagcgggtctat
ccggtggggcggctcgattacgatacggaagggctgctgttgctgacgaatgacggcgaa
ctagcgaacctgctgacccatccgcgccatcatgtaccgcgcacgtatctggcgaccgtc
aaagggattccccacggcacatcgctcgaaaagctgcagaagggcatcgagctcgaagac
ggtgtgacggcgccggccgaagtggaatattacgacgtcgatacggagaaaaatgaggcg
accattacgattacgattaccgaagggcggaaccggcaagtcaggcggatgttcgaggcg
atccgtcatccggtccggaagctgaagcggatcaagttcggagacttgacgctgcagtcg
ctgccgagaggcaaataccgccatttgacgcagcaggaagttcaggacttgcggaatttg
gccgctcagacacataaagttcataaatag
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