Paenibacillus sp. 32O-W: IJ21_24530
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Entry
IJ21_24530 CDS
T04219
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pow03009
]
IJ21_24530
Enzymes [BR:
pow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
IJ21_24530
Ribosome biogenesis [BR:
pow03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IJ21_24530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
GGDEF_2
TCL1_MTCP1
Motif
Other DBs
NCBI-ProteinID:
ALS27849
LinkDB
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Position
complement(2696737..2697474)
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AA seq
245 aa
AA seq
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MTMRPEIPILYEDNHLLAVVKPPGIPSQGDDSGDPDMLTLLREDLKRRYNKPGNVYLGLV
HRLDRPAGGAMLFAKTSKAASRLSDAVRTRAFGKSYIAVVHGSPKPASARLTHYLLKDAA
RNRVTALPGPAPGAKEAVLTYRTAGQANGLTLVAVTLHTGRPHQIRAQMAAIGCPLAGDV
KYGGSKPEDGRTIALWSAMVAVAHPVTKQWMTFRSLPPAHAAPWRLWPEEQLAAAAAMAE
TDAAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcggccggaaattccgattctatacgaggacaaccatttgctggcggtcgtc
aagcctcccggcattccgtcgcaaggggacgattccggcgatcccgacatgcttaccctg
cttcgcgaagacctgaaacgtcgctacaacaagccgggcaacgtgtatctcggactcgtc
caccgtctcgatcgcccggccggcggcgccatgctgttcgcgaaaacgtcgaaagccgct
tcgcggctctccgacgccgtacggacacgggcgttcggcaaatcgtacatcgccgttgtc
cacggctcgccaaagccggcatccgccaggctgacccattatttgctcaaggatgcggcg
cgcaaccgggtaacggcgctcccggggccggcgcccggcgccaaggaagccgtcctgact
taccggacggccggtcaggcgaacggcttgacgctcgtcgccgtcacgctccataccgga
cggccgcatcaaatccgcgcgcagatggccgccatcggctgcccgcttgccggcgacgtc
aagtacggcggcagcaagccggaggatggccggacgatagcgctatggtcggccatggtc
gccgtcgcccacccggtcaccaagcagtggatgacgtttcgctcccttcctcccgcccat
gctgctccatggcgcctatggccggaagagcagctcgcggcagcggcggcaatggccgaa
acggatgcggcggaataa
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