Paenibacillus sp. 32O-W: IJ21_35730
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Entry
IJ21_35730 CDS
T04219
Name
(GenBank) subunit epsilon of DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03030
DNA replication
pow03430
Mismatch repair
pow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ21_35730
03430 Mismatch repair
IJ21_35730
03440 Homologous recombination
IJ21_35730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pow03032
]
IJ21_35730
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_35730
Enzymes [BR:
pow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ21_35730
DNA replication proteins [BR:
pow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IJ21_35730
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IJ21_35730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
RESC5
Motif
Other DBs
NCBI-ProteinID:
ALS28961
LinkDB
All DBs
Position
complement(3910289..3911023)
Genome browser
AA seq
244 aa
AA seq
DB search
MKEQKGVGRMWHLYKLGGFAPAVASMLGAQNAQQMAFIRSVAKEQRKQSMLDTPLQELEA
VVFDLETTGFNPYGGDEIIAIGGVLMRGGERVADGTFYTLVNPRRRIPLHIIELTGITNE
MAAESPDLLQALHDFMEFVGKRLLIAHGSKHDKQFLSAALWKTSKVALNHRVLDTMMVAK
WLEPGRPAYGLDELLESAGIPIENRHHALYDSLMTAELWRSYLRRIRERNIITLGDLYAY
LSNH
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcagaaaggcgtcggacgcatgtggcatctgtacaagctcggaggtttcgcg
ccggctgtcgcttcgatgctcggcgcccagaacgcgcagcagatggcgttcatccgttcg
gttgcgaaggagcagcgcaaacagtcgatgctggatacgccgctgcaggagctggaagcg
gtcgtcttcgatctggagacgaccggttttaatccttacggcggcgacgaaattattgcg
atcggaggcgtgctgatgcgcggcggcgaacgggtggccgatgggacgttctacacgctc
gtcaatccgcgccgccgcataccgcttcatattatcgagctgaccggcattacgaacgag
atggcggcggagtcgccggatttgctgcaggcgctgcacgattttatggagtttgtcggg
aagaggctgctgatcgctcacggctcgaaacatgacaagcaatttttaagcgcggcgttg
tggaaaacgtcgaaagtcgcgctgaatcaccgggtgctcgatacgatgatggtggccaaa
tggctggaaccgggccggccggcctacgggctggacgaattgctcgaaagcgcgggcatt
ccgatcgaaaaccggcatcacgcgctgtacgattcactgatgaccgccgagctgtggcgg
tcgtatttgcgccgcatacgcgagcgcaatattataacgctcggcgatctatacgcttat
ttgagcaaccattag
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integrated database retrieval system
