Paenibacillus sp. 32O-W: IJ21_37680
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Entry
IJ21_37680 CDS
T04219
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03030
DNA replication
pow03410
Base excision repair
pow03420
Nucleotide excision repair
pow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IJ21_37680
03410 Base excision repair
IJ21_37680
03420 Nucleotide excision repair
IJ21_37680
03440 Homologous recombination
IJ21_37680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pow03032
]
IJ21_37680
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_37680
Enzymes [BR:
pow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IJ21_37680
DNA replication proteins [BR:
pow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IJ21_37680
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IJ21_37680
NER (nucleotide excision repair)
GGR (global genome repair) factors
IJ21_37680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ALS29154
LinkDB
All DBs
Position
complement(4136217..4138886)
Genome browser
AA seq
889 aa
AA seq
DB search
MNKWVLIDGNSIANRAFYAIKPLTTSAGLNTNAVFGFTTMLLRLLEEEKPSHMLVAFDAG
KVTFRHKDYGDYKGGRAKTPPELSEQFPLMKELLHSFGISQYELEGYEADDIIGTLSRIA
EERGDEVVIVTGDKDMLQLATDRVTVLLTRKGVSEVERFSPAAIKEKYGLEPLQIIDLKG
LMGDPSDNIPGIPGVGEKTALKLLHEYGSVEEVLAHSNELKGKMKEKVEQHKDDAIMSKE
LATIFREVPLEREPDELAYRGYDPAALAEAFRKLEFRSLIERLGLPGEGGAAADASADAA
ELDIVAIASEDETDKLSAMADALAQSQGVYIEAIGENPHHAVVLGLAVAAGGRVYAAALE
ALQGEAGAPIRSWLADAGAPKVGYDLHKAELALHWLGWELRGTAFDVQLAGYLLDPTDTS
QTISGLAQRYGLPAVPTDESVYGKGAKFKVPDTETMLRHLAVKADAIVRIAVRQKEDLER
DGMHRLYYELEQPLSAVLAGMEKQGIVVNAEALEQLGRELERDIAATMTEIYRLAGTEFN
INSPKQLGDILFDKLGLPVIKKTKTGYSTDADVLEKLEPYHEIVPLILHFRQLSKLQSTY
VEGLLKEIRRDTGKVHTYFRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKAFVPSEEGW
YILAADYSQIELRVLAHISGDERLKEAFINDLDIHTKTAMDVFGVKAEEVDANMRRQAKA
VNFGIVYGISDFGLSQNLNITRKEAAAFIDQYFAAFTGVRAYMDNIVAQARADGYVTTLL
ERRRYLPEIKASNFNLRSFAERTAMNTPIQGTAADIIKLAMVRMHERLKEQGLRSRMLLQ
VHDELVFEVPEDELETMKTLVPEVMENAIELDVPLKADVHYGVNWYEAK
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatgggttttgatagacggcaacagtatcgcgaacagagctttttacgccatt
aaaccgctgacgacctcggccggcctgaacacgaatgcggtgttcggctttacgacgatg
ctgctgcgcctgctggaagaagagaagccttcccatatgctcgttgcgttcgacgccggc
aaagtgacgttccgtcacaaagactacggcgattacaagggtgggcgggccaagacgcct
cctgagctgtccgagcagttcccattgatgaaggagctgctgcattcgttcggcatctcc
caatacgagctggaaggctacgaggcggacgatattatcgggacgctgtcgcgcatcgcg
gaggagcgcggtgacgaggtcgtcatcgtcaccggcgacaaagatatgctgcagcttgcg
acggatcgcgttacggtgctgctgacccgcaagggcgtcagcgaggtggagcgattctcg
ccggctgccatcaaggagaagtacgggctcgaaccgttgcaaattatcgacctgaagggg
ctgatgggcgatccgtccgacaatattccgggcatccccggagtcggcgagaagacggcg
ctgaagctgctgcacgaatacggttcggtggaagaagtgctggcgcattcgaacgaactg
aaaggcaaaatgaaagagaaggtcgagcagcataaggacgacgccatcatgagcaaggag
ctggcgacgattttccgagaagtgccgctggagcgggaaccggacgagctggcataccgc
gggtacgatcccgccgcgctggcggaagcgttccgcaagctggagtttcgttcgctgatc
gagcggctcggactgcccggggaaggcggagccgccgccgacgcgtccgccgacgcggcg
gagctcgatatcgtcgcgatcgcatcggaggacgagacggacaagctgtccgcgatggcc
gatgcgctggcgcagtcgcaaggcgtgtatatcgaggcgatcggcgaaaacccccatcat
gcggtcgtgctcggtctggcggttgcggctggcggccgcgtatatgcggccgctctcgaa
gcgctgcaaggcgaagcgggcgccccgatccgcagctggctggccgatgccggggcgccg
aaagtcggctacgacctgcacaaggcggagctggcgctgcattggctcggctgggagctg
cgcggaacggcgttcgatgtgcagcttgccggctatttgctcgatccgacggatacgtcc
cagacgatcagcgggctggcgcagcggtacggtctgccggccgttccgaccgacgagtcg
gtctacggcaagggagccaaatttaaagtgccggatacggaaacgatgctgcgccatctc
gccgtcaaggccgacgccatcgtaaggattgcggttcggcagaaggaggacctggagcgg
gacggaatgcaccggctctattacgagctcgagcagccgctgtccgcggtgctggccgga
atggagaagcagggtatcgtggtcaatgccgaagcgctggagcagctcggacgcgagctg
gaacgggatatcgcggcgacgatgacggaaatttaccggcttgccggcaccgaattcaac
atcaattcgccgaagcagctcggcgacattctgttcgacaagctgggactgcccgtgatc
aagaaaacgaagaccggctactcgaccgacgcagacgttctggagaagctggagccgtat
catgaaattgtgccgctcattttgcatttccgccaattgtcgaagctgcagtcgacgtat
gtggaaggcttgctgaaggagattcgccgggatacgggcaaggtccatacgtatttccgc
cagacgattgcggcgaccggccggctcagcagccagtttccgaatttgcaaaatatcccg
atccggctggaggagggacgcaaaatccgcaaggcgttcgtgccctcggaagaaggctgg
tatattctggccgccgactactcgcagatcgagctgcgggtgctggcccatatatcggga
gacgagaggttgaaggaagcgttcatcaacgatctggacattcatacgaaaacggcgatg
gacgtgttcggcgtcaaggccgaggaggtggacgcgaacatgcggcggcaggcgaaagcc
gtcaatttcggcatcgtctacggcatcagcgatttcggcctgtcgcaaaacctgaatatt
acgcggaaggaagcggcggcgtttatcgaccagtatttcgccgcgttcacgggcgttcgc
gcctatatggacaatatcgtcgcgcaagcgcgcgccgacggttatgtgacgacgctgttg
gaacggcggcggtatttgccggaaatcaaggcgtcgaacttcaacctgcgctcgttcgcc
gagcggacggcgatgaatacgccgatccaggggacagccgccgatattatcaagctggcg
atggttcgcatgcacgaacggttgaaggaacaggggctgcgcagccgcatgctgcttcag
gtgcatgacgagctcgtgttcgaggtgcctgaagacgaactggagacgatgaaaacgctc
gtgcccgaagtgatggagaacgcgatcgagctcgacgttccgctcaaggccgacgttcat
tacggcgtcaattggtatgaagcgaagtaa
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