Paenibacillus sp. 32O-W: IJ21_40100
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Entry
IJ21_40100 CDS
T04219
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
pow
Paenibacillus sp. 32O-W
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pow03021
]
IJ21_40100
Transcription machinery [BR:
pow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IJ21_40100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
HTH_AsnC-type
HTH_24
Histone_HNS_N
Xre-like-HTH
HTH_28
HTH_36
HTH_DeoR
HTH_23
HTH_3
HHH
HTH_11
DUF977
Motif
Other DBs
NCBI-ProteinID:
ALS29396
UniProt:
A0A0U2WLV6
LinkDB
All DBs
Position
complement(4432525..4433328)
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AA seq
267 aa
AA seq
DB search
MLLVLFKRFLRKTGSAGSAGKRNKSTPEEIVNCIQAGDDSLRDQFIAEYQPYIAKVTSKF
CKRYIDPSRDDEFSVALAAFNEAIQQYAKDAGRSFLGFAETVIRRRLIDHVRKEQRHANL
VPYSSFDAEDEDQQTLNPIETQQALERFQLEREAEERRLEIEEYSRKLAEFGISFEELAE
SSPKHADSRLMLFEIGKRLCEERPLFEALRKKGRLPVKELAALSGVSRKTVERNRKYLIA
VALIFDGKYPYLQAYLQPEQSAEGVGT
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
ttgctgctcgttttgtttaaacgctttttacgcaagaccggttccgccggatcggcggga
aagcgaaacaagagtacgccggaagagatcgtcaactgcattcaggcaggggacgacagc
cttagagatcaatttattgctgaatatcagccgtatattgcgaaagtgacgagcaagttc
tgcaaacgatatatcgatccgtcgcgcgacgacgagttcagcgtcgcgcttgccgcgttt
aacgaggcgattcaacagtacgccaaggatgcgggccgttcatttctcggcttcgcggag
acggttatacggaggaggctgatcgatcacgtacgcaaggaacagcgccatgcgaatctg
gtgccttacagcagctttgatgcggaggatgaggaccagcagacgctcaatccgatcgaa
acgcagcaggcgctggagcggtttcagctggagcgggaagccgaggaacgccgtcttgaa
atcgaagaatacagccgcaagctggccgagttcggcatttcgttcgaggagctggcggaa
tcttcgcccaagcacgcggattcccggttaatgttgtttgagattggcaagcggctttgc
gaggagaggcccttgttcgaggcgctgcgcaaaaagggacgcctgcccgtcaaggaactg
gcggcgctgtccggcgtttcgcgcaagacagtagagcgaaaccgcaaatatttgattgcg
gtcgcgctcatttttgacgggaaatatccttacttacaagcttatttgcagcctgaacaa
tcggcggagggagtaggaacatga
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