Paenibacillus sp. 32O-W: IJ21_43230
Help
Entry
IJ21_43230 CDS
T04219
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
pow
Paenibacillus sp. 32O-W
Pathway
pow03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
IJ21_43230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pow03400
]
IJ21_43230
DNA repair and recombination proteins [BR:
pow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
IJ21_43230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ALS29686
LinkDB
All DBs
Position
4772191..4773183
Genome browser
AA seq
330 aa
AA seq
DB search
MHTVWKGAISFGLVHVPVKMFSATEDKDISLRMIHKVCGGPIAYVRHCPNCETEVAWDDI
VKGYEYEKGHYVLFEKEELEQIAGERSKTIQILDFVDLDEIDPIYFQKTYYLSPDQAGGN
AYNLLMRAMSETGRIGIAKVSIRSKSSMAAIRVIDNCLAMETIFYPDEIRPVSQVPGLPE
EVKVNDKELTMAKLLIEQLSTPFEPEKYTDDYRERLFDLISRKIAGEEVRIAPQQEPANV
IDLMAALQASLESIRVSPEGGALDTGAAAKSGKTAGAGTGAKADAAKSTAKSAAKGKPAA
KAGNDETDDNEAGRGKTGAARTKKAKETVS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcatacggtatggaaaggcgccatcagcttcggtcttgtgcatgttccggtcaaaatg
ttttcggctacggaggataaagatatttcgctccgcatgatccacaaagtttgcggaggg
ccgatcgcttacgtgaggcattgtccgaattgcgaaaccgaggtggcatgggacgatatc
gtcaaagggtacgagtacgaaaaaggacattatgtgctgttcgaaaaggaagaactggag
cagatcgccggcgaacggtccaaaacgattcaaattctcgatttcgtcgatctggatgag
atcgacccgatttatttccaaaagacgtattacttgtcccccgatcaggcaggcggcaac
gcctataatttgctgatgcgggcgatgtccgaaaccggccggatcggcattgcgaaagta
tcgatccgctccaaaagcagcatggcggccatacgcgtcatcgacaattgcctggcaatg
gaaacgattttctaccctgacgaaattcgtcccgtcagccaggtgccgggcttgcccgaa
gaggtcaaggtcaacgacaaggagctgacgatggcgaaactgctgatcgaacagctttcc
actccgttcgagcccgaaaaatataccgacgattaccgcgagcggctgttcgacctgatc
agccggaaaatcgccggagaggaggtccgcatcgcacctcagcaggaacccgcgaatgtg
atcgatctgatggccgcgctgcaggccagtctcgaatcgattcgcgtctccccggaaggc
ggcgcgctcgacaccggcgcggcggccaaaagcggcaaaaccgccggagcgggaacaggc
gcaaaagcagatgcggccaaaagcactgccaaaagcgcagccaaaggcaagccggcagcc
aaagccggcaacgacgaaacggacgacaacgaggccggccggggcaaaacgggggctgcg
cggaccaaaaaagcgaaggagacggtatcctga
DBGET
integrated database retrieval system