Pandoraea oxalativorans: MB84_00090
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Entry
MB84_00090 CDS
T03840
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MB84_00090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pox03019
]
MB84_00090
03009 Ribosome biogenesis [BR:
pox03009
]
MB84_00090
03036 Chromosome and associated proteins [BR:
pox03036
]
MB84_00090
Enzymes [BR:
pox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
MB84_00090
Messenger RNA biogenesis [BR:
pox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MB84_00090
Ribosome biogenesis [BR:
pox03009
]
Eukaryotic type
90S particles
RNase
MB84_00090
Prokaryotic type
rRNA processing factors
MB84_00090
Chromosome and associated proteins [BR:
pox03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
MB84_00090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AKC68204
UniProt:
A0A0E3U4E0
LinkDB
All DBs
Position
complement(4612525..4613436)
Genome browser
AA seq
303 aa
AA seq
DB search
MEFLGDSILNCSVAAILFRRYGKLDEGDLSRVRANLVKQQSLYEIAQTLGVSDFLRLGEG
ELKSGGFRRPSILADTLEALFGAMYLDGGFEKAYAVIERLYTPVLEHVDPKTLGKDAKTL
LQEYLQGHKIALPQYTVIATHGAAHNQQFEVECTVPKLDIKVGGSGASRRAAEQAAAKNA
LEEVQKMPALAKPKAEKSAKAAKKRAAKAAASEAKKAGQVGQAGQLTVASQAESKDAKES
REPKEARDGAVGATTAPAMTASSHNAPRNAAASPEKSADKSAEKPAEKPTDKADAAKQPP
AAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
ctggagtttctcggcgattccattctgaactgttcggtggcagcgattctgttccgtcgc
tacggcaagctcgacgaaggcgacctctcacgtgtgcgcgccaatctcgtgaagcaacaa
tcgttgtacgagatcgcgcagacgcttggcgtttccgattttcttcgcctgggcgaaggc
gagctcaagagcggtggtttccgtcgtccctcgattctggccgacacgctcgaagcgttg
ttcggggcgatgtacctcgacggcggtttcgagaaggcctatgcggtgatcgagcggctg
tacacgcccgtgctcgaacatgtcgatccgaagacgctcggcaaagacgccaagacgctg
cttcaggaatacctgcaaggccacaagatcgcgctgccacagtacacggtgatcgccacc
cacggggcggcgcacaaccagcagttcgaggtcgagtgcaccgtgccgaagctcgacatc
aaggtgggtggttcgggggccagccgtcgtgcggccgagcaggcagcggccaagaacgcg
ctggaagaggtgcagaagatgcccgcgctggcgaagccgaaggccgagaagagtgcgaag
gcggcgaagaagcgtgctgccaaggcggcggcctcggaggcgaagaaggccggacaggtg
gggcaggccgggcaactgacggtggcgtcgcaggccgagtcgaaagacgcgaaggagtcc
cgcgagccgaaggaggcgcgtgatggcgcggtcggggcgaccacggcgccggccatgacc
gcgtcgagccacaatgcgcctcgcaacgcggccgcatcgcccgagaagtctgccgataag
tccgctgaaaagcccgccgaaaagccgaccgacaaggccgacgccgccaagcaacctccg
gcagctgcctga
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