Pandoraea oxalativorans: MB84_02210
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Entry
MB84_02210 CDS
T03840
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pox
Pandoraea oxalativorans
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pox03000
]
MB84_02210
Transcription factors [BR:
pox03000
]
Prokaryotic type
Helix-turn-helix
Other families
MB84_02210
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_30
PAS_4
HTH_23
AAA_5
HTH_50
HTH_22
HTH_29
PAS_9
HTH_7
HTH_psq
HTH_20
HTH_28
RWP-RK
HTH_17
AAA_16
HTH_1
Diguanyl_cycl_sensor
HTH_Tnp_1
AAA_2
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AKC68514
UniProt:
A0A0E3U4R4
LinkDB
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Position
complement(5084837..5086798)
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AA seq
653 aa
AA seq
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MPASTEAAHARRVLNVAQGHLPSGSVATDPNIASSWRRCLDTHALDPGARMAPRVLESSQ
LRERRNAMERLRNVSMPVLERLQRQLMNPRQAVLLTAPDGVIVDSRLHDGTRDDFHRAGL
WPGADWSESCEGTNGIGTCAVERAPVIICQQDHFRALHTPLTCTASPVFAPQGDLLAVID
VSSTSTDLTRQSQFHTLALVNLSAKVVESEYFFQHYRDEWLLQWQEQADHLGGFAQALLA
FDDAGRVLAANQSALNCLGVTRDALVGTRVDRWFVQTLDTLLAQAHPSPSTCWPLHANTG
ANAGESLLAMLRAPARALRRAPGVSRTVPEVVTEPFSDRTLARAFARACRVFAHDVPVLI
RGETGSGKEVFARAVHAASARSGGPFVALNCAAIPESLIESELFGYVGGSFTGARKEGMA
GKLWQANGGTLFLDEIGDMPFAMQTRLLRVLEDRMVSPLGGGEPVPLGIRVLSATHRDLS
ERIGERLFREDLFYRLSGLEVTVPPLREREDKVEVIQRLFAQAESSGRCPAVHVTPAALD
RLCHHAWPGNVRQLRSVIRTLVALSENGVVTVDDLPGELREADIAMADASPSASSSNSPA
DGLSEAPLEAAERQALRAALDACQGQVSAAARRLGVSRNTLYRKLRRFGLLRG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgccagccagtacggaagccgcacatgcacgccgtgtgctgaacgtcgcgcagggccat
ttgccatcgggctcggtggcgaccgacccgaacatcgccagttcgtggcggcgctgtctc
gacacgcacgcgctcgatccgggcgcgcgcatggcgccgcgcgtgctcgaatcctcgcaa
ttgcgcgagcgtcgcaacgcaatggagcgcctgcgcaatgtgtccatgccggtgctggaa
cgtctgcaacgtcagttgatgaacccgcgtcaggccgtgttgctcacggccccggatggc
gtaatcgtcgattcgcgtctgcatgacggcacccgcgacgacttccatcgcgccgggcta
tggccgggcgcggactggagcgaatcgtgcgaggggaccaacggtatcgggacgtgcgcc
gtcgaacgcgcgcccgtcatcatctgtcagcaagaccactttcgcgcactgcatacgccg
ctcacctgcacggcgagtccggtgttcgcgccgcagggcgatttgctggcggtgatcgat
gtgtcgtccaccagtacggatctcacgcgtcagagtcagtttcatacgctggcgctggtc
aacctgtcggctaaggtcgtcgagagcgagtatttctttcagcactatcgcgacgaatgg
ctgctgcaatggcaggagcaggccgaccatcttggcgggttcgcacaggcgttgctcgcg
ttcgacgatgccgggcgagtgctcgccgccaatcaaagcgcactgaattgtcttggggtg
acgcgcgacgcgctggtgggcactcgcgtcgaccgatggttcgtgcagacgctcgatacc
ttgctcgcgcaggcgcatccgtcgccgagtacgtgctggccgttgcacgccaacaccggt
gcgaacgcgggcgagtcgctgctggcgatgctgcgcgcgcccgcgcgcgcactccggcgt
gcgcccggtgtgtcgcgcactgtgccggaagtggtcacggaaccgttctccgatcgcacg
ctggcgcgcgcgtttgcacgcgcatgccgcgtcttcgcgcacgacgtgcccgtgctgatt
cggggtgaaacgggaagcggcaaagaagtgttcgcgcgcgcggtgcacgcagcgagtgcg
cgctcgggcgggccgttcgtcgcactcaattgcgcggcaattcccgagtcgttgatcgaa
agcgaattgttcggctatgtgggcggcagcttcaccggtgcgcgcaaagaggggatggcg
ggcaagctgtggcaggcgaacggcggcacgttgtttctcgacgagatcggcgacatgccg
ttcgcgatgcaaacgcgcttgctgcgggtgctggaggaccggatggtgtcgccgctgggt
ggtggcgagccggtgccgctgggcattcgcgtgctgagcgccacgcatcgcgatctctcc
gaacgtatcggcgaacggctgtttcgcgaggatctgttctatcgtctgagtgggctcgaa
gtcaccgtgccgccgttgcgcgagcgcgaggacaaggtcgaggtgattcagcggctgttc
gcacaggcggagtcgtcgggccgttgtcctgccgtgcatgtgacgcccgctgcgctcgac
cggttgtgtcatcacgcgtggccggggaatgtgcgtcagctacgcagcgtcatccgcacg
ctggtggcgctcagcgagaacggcgtcgtcaccgtcgacgatctgccgggcgaactgcgc
gaagcggacatcgcgatggcggacgcctcaccgtctgcgtcatcgtccaattcaccggcc
gacggattgtccgaggcacctttggaagcagcggagcgtcaggcgctgcgagcggcgctc
gacgcctgtcaggggcaggtgagcgccgcagcgcgacggctcggcgtgagccgcaacacg
ctgtatcgcaagctcaggcgcttcgggttgctgcgcgggtga
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