Pandoraea oxalativorans: MB84_03250
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Entry
MB84_03250 CDS
T03840
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pox
Pandoraea oxalativorans
Pathway
pox02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MB84_03250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pox03021
]
MB84_03250
Transcription machinery [BR:
pox03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MB84_03250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_24
HTH_20
GerE
PhyR_sigma-like
HTH_IclR
HTH_29
HTH_40
HTH_28
HTH_10
HTH_11
HTH_17
HTH_5
TnsD
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AKC68685
UniProt:
A0A0E3Y8W5
LinkDB
All DBs
Position
complement(5300158..5300691)
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AA seq
177 aa
AA seq
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MPADDTLQRDTSLGTLNTLQGLYNDHHGWLHGWLHRKTGCSHRAADLAHDTFVRLLERDP
PRLLASPRAFLTTVAQRVLYNYWRREQIERAYLDALAQQPEALAPSPEARAIVLETLLEI
DRCLDGLPPLVKRAFLLAQLDGLTHPEIAAELGISLATVKRHLVRAGTQCFFAMGMA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacacgctgcagcgcgacacttcgctgggtacgctcaatacgctgcag
ggactctacaacgaccatcacggctggcttcacggctggctgcatcgcaagaccggctgc
tcgcatcgcgcggccgatcttgcgcatgacactttcgtccgtctgctggagcgcgatccg
ccccgcttgctggcgtcgccgcgcgcgttcctcacgaccgtcgcgcagcgcgtcctctat
aactactggcgacgcgagcagatcgagcgcgcctatctcgacgccctggcgcaacaaccc
gaagcgcttgccccgtctcccgaagcgcgcgccatcgtgctggagacgctgctcgaaatc
gaccgctgtctcgacggtctgccaccgctcgtcaaacgtgccttcctgctggcgcaactg
gacggcctcacgcatcccgaaatcgccgccgaactcggcatttcactggcgacggtgaaa
cgtcacctcgtgcgtgcgggcacgcagtgcttcttcgcgatggggatggcatga
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