Pandoraea oxalativorans: MB84_07385
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Entry
MB84_07385 CDS
T03840
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MB84_07385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pox03400
]
MB84_07385
Enzymes [BR:
pox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MB84_07385
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MB84_07385
DNA repair and recombination proteins [BR:
pox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MB84_07385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AKC69337
UniProt:
A0A0E3YCH4
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All DBs
Position
591364..592194
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AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRGIAPHVAGTRVARIDVRNGSLRWPVPAGLDALLRGETLIGVTRRGKYL
LLEYAPGWLLVHLGMTGTLRVVPEPQSLPSAGVHDHIDLVFERCALRYRDPRRFGAVLFH
PRASGDVLLHPLLASLGVEPLTDDFDGAWLYAGTRGRTVSIKQALLAGSIVVGVGNIYAS
ESLFRAGIHPRMAAGKLSRPRAEKLAQAVKTVLAAAIEKGGSTLRDFVGSDGQSGYFQQE
YFAYDRAGQPCRVCGTTIRQIVQGQRSTFFCPKCQK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactcccagaagtcgaagtcacccgccgcggtatcgcgccgcacgtagccggc
acgcgtgtcgcgcgcatcgacgtgcgcaacgggtcgttgcgctggccggtgcccgccgga
ctcgacgccctgctgcgcggcgaaacgctcatcggtgttacccgtcgcggcaagtacctc
ctgctcgaatacgcgcccggctggttgctcgtgcatctgggtatgaccgggacgttgcgc
gtcgtgccggaaccgcagtcgctgccgagcgcgggcgttcacgaccatatcgatctcgtc
ttcgaacgatgcgcgctgcgctatcgcgacccgcgccgcttcggggccgtcctcttccat
ccgcgtgcgtcgggcgatgtgctgctgcatccgctgctcgccagtcttggcgtcgagccg
ctgaccgacgatttcgacggcgcatggctttacgcaggcacgcgcggacgcaccgtctcc
atcaaacaggcgctgctcgcgggcagcatcgtcgtgggggtgggcaacatctacgcctcg
gagagcctgttccgtgcaggcattcatccgcgcatggcagcgggcaagctgtcgcgcccg
cgtgccgagaagcttgcgcaagccgtcaagacggtgctcgcagcggccatcgaaaaaggc
ggcagtacgttgcgagacttcgtcggcagcgacggacagagcggctatttccagcaggag
tatttcgcctacgaccgtgcgggccagccgtgtcgcgtgtgcggcacgacgatccggcag
atcgtgcagggacagcgctccacgttcttctgcccgaaatgtcagaaataa
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