Pandoraea oxalativorans: MB84_20920
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Entry
MB84_20920 CDS
T03840
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox03420
Nucleotide excision repair
pox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MB84_20920
03430 Mismatch repair
MB84_20920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pox03400
]
MB84_20920
Enzymes [BR:
pox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MB84_20920
DNA repair and recombination proteins [BR:
pox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MB84_20920
MMR (mismatch excision repair)
Other MMR factors
MB84_20920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AKC71397
UniProt:
A0A0E3YDQ2
LinkDB
All DBs
Position
complement(3699952..3702270)
Genome browser
AA seq
772 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQQGHVGPAGILAVTF
TNKAAKEMQARLGAMLPISTRAMWIGTFHGLCNRMLRAHFRDAGLPQSFQILDQSDQLSA
IKRMMKAANVDDEKFPPKNLQYFVNNAKEQGLRPHEVEANDAFNQKFVELYASYQEQCQR
EGVVDFAELLLRCFELLKHNEPLRVHYQSRFRHILVDEFQDTNKLQYAWLKMLAGTQAAV
FAVGDDDQSIYAFRGANVGNMADFEREFRVRHLIKLEQNYRSHGNILDAANALISNNARR
LGKNLRTDAGHGEPIRVYEAATDLQEASWLVEEIKALVAQGLSRQDVAILYRSNAQSRVM
EHALVGAGIAYRVYGGLRFFERQEVKHALAYLRLIENPNDDTAFARIVNFPTRGIGARSL
EQLADAARLYNCSMYAAVPYMTGKAGTNLLAFVRMIEQMRHATERLTLPEVVTHVIDASG
LIAHYQTEKEGQDRIENLQELVHAATAFIAEEGYGLDAPARLIAMRPALPGAPDVLASPD
GVVDADTPVEMTPLAGFLSHASLEAGDNQAEAGQDAVQLMTVHAAKGLEFTAVFVTGLEE
GLFPHENSALELDGLEEERRLMYVAITRAKERLYLSFTQSRMLHGQTRYNVRSRFFDEIP
EEVLKFLTPRAQPGARLAQSEPAWGRDWFARPQVSAPKDEWAATKSEQALADRSRASETG
FKLGQGVFHTKFGEGKIIGLEGTGDEARAHVKFGRHGEKWLALAVAKLQPIE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctcgccaatctgaaccccgaacaactggccgccgtcacgcttcccgac
gagccggccctcattctcgcgggcgcgggttccggcaagacacgcgtgctcacgacccgt
atcgcctggctgatccagcagggccacgtcggcccggcgggcattctggcggtgaccttt
accaacaaggccgccaaggaaatgcaggcccggctgggcgcaatgctgccgatcagcacg
cgcgccatgtggatcggcaccttccacgggctgtgcaaccgcatgctgcgcgcgcatttt
cgcgacgccgggctgccgcagagcttccagatcctcgaccagtccgatcaactctccgcc
atcaagcggatgatgaaggcggcgaacgtcgacgatgagaaatttccgccgaaaaacctc
caatatttcgtcaacaacgcgaaggaacagggcttgcggccgcacgaagtcgaggccaac
gacgcgttcaaccagaagttcgtcgaactgtacgcgagctaccaggaacagtgccagcgc
gagggcgtggtcgatttcgccgaactgctgctgcgctgcttcgaactgctcaagcacaac
gaaccgctgcgcgtgcactaccagtcgcgcttccgccatatcctcgtcgatgagttccag
gacaccaacaagctccagtatgcgtggctgaagatgcttgctggcacccaggctgccgtg
ttcgccgtgggcgacgatgatcagagtatctacgcgtttcgtggtgctaacgtcggtaat
atggctgacttcgaacgtgaatttcgcgttcgtcacttaatcaagctggagcagaactat
cgctcgcacggcaatattctcgacgccgcgaacgcgctgatttccaacaacgcacggcgt
ctgggcaagaatctgcgcaccgacgcgggccatggcgagccgattcgcgtctatgaagcg
gcgaccgacctgcaagaggccagttggctcgttgaggaaatcaaggcgctggtcgcgcag
ggcctgtcgcgacaggatgtggccattctgtaccgcagcaacgcccagtcgcgggtgatg
gagcatgcgctggtcggcgcgggcatcgcctaccgcgtgtatggcggcctgcgctttttc
gagcgtcaggaagtcaagcacgcgctggcgtatctgcgtctgatcgagaacccgaacgac
gacacggcgttcgcccgcatcgtcaatttccctacgcgcggcatcggcgcacgttcgctg
gagcaactggcggacgcggcgcgcctctataactgctcgatgtatgcggctgtgccttac
atgaccggcaaggccgggaccaatctgctggcgttcgtgcgcatgatcgaacagatgcgc
catgccaccgagcggctcacgttgccggaggtggtgacgcatgtcatcgacgcgagcggc
ctgattgcgcactatcagaccgagaaggaagggcaggaccgcatcgagaacttgcaggaa
ctggtgcatgccgccacggccttcatcgctgaagaggggtatgggctggatgcgccggcg
cgtttgatcgcgatgcgccccgcactgccgggcgcgcctgacgtgctggcgtcgcccgat
ggcgtggtcgatgccgacacgcccgtcgagatgacgccgctggcaggctttctctcgcac
gcatcgctcgaagcgggcgacaaccaggccgaagccgggcaggacgccgtgcaactgatg
acggtgcacgccgccaaggggctggaattcacggcggtgttcgtcacgggcctcgaagag
gggctgttcccgcatgagaacagtgcgctcgaactcgacgggctcgaagaagagcgtcgt
ctgatgtatgtggcgattacgcgcgcgaaggagcgtctgtacctgtcgttcacgcaaagc
cgcatgctgcatggccagacgcgctacaacgtgcgctcgcgctttttcgacgaaatccct
gaggaagtgctcaagttcctcacgccacgtgcgcagccgggggcgcgtctcgctcagagc
gaaccggcttgggggcgcgactggttcgcacgcccgcaagtcagcgcgccgaaggacgaa
tgggcagcgacgaagtcggagcaggccttggccgaccgctcgcgcgcgtcggagacgggc
ttcaagctggggcagggcgtattccacaccaagttcggcgaaggcaagatcatcggactg
gaaggcacgggcgacgaagcgcgtgcgcatgtgaaattcggccgtcatggcgagaaatgg
ctggcgctggcggtggcgaagcttcagccgatcgagtga
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