Pandoraea oxalativorans: MB84_21415
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Entry
MB84_21415 CDS
T03840
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pox
Pandoraea oxalativorans
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pox01011
]
MB84_21415
Enzymes [BR:
pox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
MB84_21415
Peptidoglycan biosynthesis and degradation proteins [BR:
pox01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
MB84_21415
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
DUF6491
Motif
Other DBs
NCBI-ProteinID:
AKC71471
UniProt:
A0A0E3YG24
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Position
complement(3809821..3811512)
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AA seq
563 aa
AA seq
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MRLIVSLLLTLLLAACASTAPTTGASNSTPDAQSKSPVASTAKGKQRVSSDQTIDLDNDS
INDLAYGSDDADLWSRIRHGFSIPDLDTDLAQDRTQWYAQRPEYVERMIQRSEKYLFHIV
EELERRHMPTELALLPFVESAYNPQALSTAKAAGMWQFIPSTGKTYNLKQNMFQDERRDV
LASTTAALDYLSKLYAMFGDWHLALAAYNWGEGNVQRAIDRNQAQGLPTDYLSLRMPTET
RYYVPKLQAIKNIIARPDIYSVKLPEIPNHPYFVSVTTKRDIDVALAAKLADLPLDEFRA
LNPSFRKPVILGAAQPQILLPFDSAEVFQRRLKGYDKPLSSWTTYTSASRERPEDVARKL
GVDAAVIRSVNNIAPRMRLKAGSTLLVPRSDDIDQDISASVASSAVLALEPDLPDTRKVM
VRARKHDTLAGVASRSGVSVAQIKSWNRLRRDTLTSGQLLVLHVPVKDASRVVAASAPEP
VAAKDDDDAPRTRLVRGKNGKMIRVVDHRPAAKPTKTAVASKAAPAAKVASKAPVKAAAK
APAKAVAKSSAKPATKVTKTAQR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatcgttagcttgctcctgacgctgcttctcgcagcgtgtgccagcacagcg
ccgaccacaggtgcatcgaattccacgcccgatgcgcagagcaaatcgcctgtcgcgtcg
accgcaaaaggcaagcagcgcgtctccagcgatcagaccatcgacctggacaacgactcg
atcaacgatctggcctacggcagcgacgacgccgatctctggtcgcgcatccgccacgga
ttttccattcccgacctcgacaccgacctcgcgcaggatcgcacgcagtggtacgcgcag
cgccccgagtatgtcgagcgcatgatccagcgttccgagaagtatctgttccacatcgtc
gaagagcttgagcgccgtcatatgccgacggaactcgcgctgctgccgttcgtggaaagc
gcatacaacccgcaggcgctctcgacggccaaggccgccggcatgtggcagttcatcccc
agcacgggcaagacgtacaacctcaagcagaacatgttccaggacgagcgccgcgatgtg
ctcgcctcgacgaccgccgcactcgattacctctcgaagctctacgcgatgttcggcgac
tggcatctcgcactggccgcctataactggggtgagggcaacgtgcagcgcgccatcgac
cgcaatcaggcgcagggtctgccgaccgattacctgagtttgcgcatgcccacggagacg
cgctattacgtgccgaagctccaggccatcaagaacatcattgcgcgtccggacatctac
agcgtgaagctgccggagattccgaatcacccgtatttcgtgagcgtcactaccaagcgc
gatatcgatgtggcgctggccgccaagctggccgatctgccgctcgacgaattccgcgcg
ctcaacccgtccttccgcaagccggtgattctgggtgctgcgcagccgcagattctgttg
ccgttcgacagcgccgaagtgttccagcgccgtctgaagggctacgacaagccgctgtcg
agctggacgacgtacacgtcggcgtcgcgcgagcgcccggaagacgtggcgcgcaagctg
ggcgtggacgccgccgtcattcgctccgtcaacaacattgctccgcgcatgcgcctgaag
gcgggctcgacgctgctggtgccgcgctcggacgacatcgatcaggacatcagcgcctcg
gtcgcgagcagcgccgtgctggccctcgaaccggatctgcccgacacgcgcaaggtgatg
gtccgcgcccgcaagcacgacacgctcgctggcgtggcctcgcgtagcggtgtgagcgtt
gcgcagatcaagagctggaaccgcctgcgccgcgacacgctgacctcaggccaactgctg
gtgctgcatgtgcccgtcaaggacgcctcgcgcgtggttgccgcctccgcaccggagccg
gtcgccgcgaaggacgacgacgatgcaccgcgcacgcgtctggtacgcggcaagaacggc
aagatgattcgtgtggtcgaccatcgtccggccgccaagccgaccaagacggcggtcgcc
agcaaggcggcaccggccgccaaggtcgcgtccaaggcgccggtcaaggctgcagcgaag
gcacctgccaaggctgtcgcgaagtcgtccgcgaagcctgcgacgaaggtcaccaagacc
gcgcagcgctaa
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