Pandoraea oxalativorans: MB84_21500
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Entry
MB84_21500 CDS
T03840
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pox
Pandoraea oxalativorans
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pox03009
]
MB84_21500
Enzymes [BR:
pox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MB84_21500
Ribosome biogenesis [BR:
pox03009
]
Prokaryotic type
rRNA helicases
MB84_21500
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
P-loop_SecA
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKC71484
UniProt:
A0A0E3U871
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All DBs
Position
3834867..3836288
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AA seq
473 aa
AA seq
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MNSKATDSRADSAPAIPFSSLPLSPAMQENLARLGYASMTPIQQASLPDMLAGHDIIAQA
KTGSGKTAAFSLGLLQRVDARDFAVQAAVLCPTRELAEQVAQEVRRIARAEDNIKVLTLC
GGSPIRPQAESLAHGAHVIVGTPGRIMDHLDRGTLSLTGIKTLVLDEADRMLDMGFFDDI
AAVARQTPASRQTLLFSATYPEGIGKLAQRFLKTPREIRLAEKHDASKIRQRFYEVRDEE
RLHAVGQLLDHFRPVSTIAFCNTRAQCNDLTDVLRAEGFHALTLHGDLEQRERDMVLIQF
ANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADEDGWAFSLATM
DEMGRVGNIEAAMGVEVQWHKLSELTPTGSGHLLPPMVTIQMLGGKKDKIRPGDVLGALT
GEAGFAATQIGKINVLENFTYIAVDRDIAPVALRKLSDGRVKGRKVKARFLQD
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaaaagccaccgattcgcgcgctgacagcgcccccgccattcccttctcgagc
ctgccgctctcgcctgccatgcaggagaacctcgcacggctcggttacgcctcgatgacg
cccatccagcaggcgtcgctccccgacatgctggccggccacgacatcatcgcgcaggcc
aagaccggtagcggcaagaccgccgccttctcgctgggcctgctccagcgagtcgacgcc
cgcgatttcgccgtgcaggccgccgtgctatgccccacgcgcgagctcgccgagcaagtc
gcccaggaagtccgccgtatcgcgcgcgccgaggacaatatcaaggtcctgacgctgtgc
ggcggctcgccgatccgtccgcaggcggaaagcctcgcgcacggcgcccacgtgatcgtg
ggcacgccgggccgcatcatggaccacctcgatcgcggcacgctctcgctgaccggcatc
aagacgctggtgctcgacgaagccgaccgcatgctcgacatgggcttcttcgacgacatc
gccgccgtcgcgcgacaaacgcccgcgtcgcgccagacgttgctcttctcggcgacgtac
cccgaaggcatcggcaagctcgcccagcgttttttgaagacgccgcgcgagattcgtctg
gcagaaaagcatgacgccagcaagattcgccagcgcttttatgaagtgcgcgacgaagaa
cgtctgcacgccgtggggcagttgctcgaccacttccgcccggtcagcacgattgcgttc
tgcaacacccgcgcgcaatgcaacgacctgaccgacgtgctgcgcgccgagggcttccat
gcgctgaccctgcacggcgatctggaacaacgcgaacgcgacatggtgctgatccagttc
gccaaccgcagttgctccgtgctggtggcaaccgacgtggccgcacgcggtctggacatc
gcgcagctcgaagccgtcatcaacgtggacgtgacgcccgaccccgaggtctacgtgcac
cgcattggccgcacgggccgtgccgacgaagacggctgggcgttcagcctggcgacgatg
gacgagatgggtcgcgtgggcaatatcgaagccgcgatgggcgtggaagtccagtggcac
aaactctcggagcttacgccgacgggcagcggacacctgctgccgccgatggtgacgatc
cagatgctgggcggcaagaaggacaagatccgtccgggcgacgtgctcggcgcgctgacc
ggtgaggccggctttgccgccacgcagatcggcaagatcaacgtgctcgaaaacttcacg
tatattgccgtagaccgggacatcgccccggtggcgctgcgcaagttgtccgatggccgt
gtgaagggccgcaaggtcaaggcaagattcctgcaggattaa
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