Pandoraea oxalativorans: MB84_23725
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Entry
MB84_23725 CDS
T03840
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pox
Pandoraea oxalativorans
Pathway
pox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MB84_23725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pox03400
]
MB84_23725
Enzymes [BR:
pox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MB84_23725
DNA repair and recombination proteins [BR:
pox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MB84_23725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AKC71815
UniProt:
A0A0E3YEA2
LinkDB
All DBs
Position
complement(4345487..4348921)
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AA seq
1144 aa
AA seq
DB search
MLHLFFSNRFTTLEAALLRDIAQAPDASAGAGNPFETETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGKLLTVPESSPFAPDRLVWPLYQCLAQPWVEASPRLAGYLAG
ADDVMRFELADRLAHIYDQYLTYRPDWLERWQSGEVISPGTSTAWGDIQRADEAWQSALW
RQVLAHLEIRERHPTLRAIDRIEQLTPESVPAGWPSRVSVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTQRDGKAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDHALFQPNPEPTLLAALQNGILSLDDGRHGAPDGVAADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTATPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAERYDLGGNVLDAIQNWLHSAGARRGWRG
DALLRLEGTGQTSRDGAMAGAGVDAPPALERHTLGDAMMRLFLGYALPDDAMPVDDWLPV
GGIEGGRAELLGQLARLIDDLDMTAVSLQTERTGLAWRDQLLAMLEQFFSDEPRFADDVA
EVRMAIEQIGTAIADGAPEVHVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLP
YRVVCMIGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLITY
TGRSVRDNAPLPPSTAVDELLDFTGQLLAPVSQGFDLDEQRKARDTLVVLHPLQPFSPAY
FDGRAPSLYSYDVANGEAAQQLAGQLASPAPDAAATPFVHAPLPAIAQTHLTLDDLLRFW
RHPGRAWARDRLGLSLGDVLTEVEDEEPFVLDWSGRDALAARLLPRLLRDDAQDARAQAA
AIERIANVSHELPGGATGAVWRRRELGGLRALATRVREAQAEGTQELLVTLPLKPALPPS
WTASTDAIWHGDATLCADCLLQGRLAPVSRHGLVMHRYGSLRPSDLLAAWLAHLALCAHL
QQPEHAGLEVAPRTLWYGEDETFALRPVDDAAALLAQWVALFRLGQTRPLPFFVRSAWKL
ASTGKMTDAESAWSGSAFARGDADDPYTKLIWRGVEDPLASPFDLLANTVFGPMVQHLEL
VEGA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctattcttctccaaccggttcaccacgctcgaagccgccctgttgcgcgac
atcgcacaggcgcctgacgcgtcggcgggggcgggcaatcccttcgagacggaaaccatc
gtcgtgcccagcgtggcggtgcgccgccgactcgaactggactatgcggacgtcttcggt
gtgtgtgcaaacgtccgcctgacgtatctggcgcaatggctctgggacatggcaggcaaa
ctactcaccgtgccggagagttcgccgttcgcgcccgatcggctggtctggccgctgtat
cagtgtctcgcgcagccgtgggtggaggcgtcgccgcggctggccggatatctggccggg
gcagacgacgtcatgcgattcgagttggccgaccgactggcccacatctacgatcaatac
ctgacttaccggccggactggctggagcggtggcaatccggtgaagtcatttcgccgggg
acgtcgacggcctggggcgacatccagcgggccgacgaggcctggcaaagcgccttgtgg
cggcaggtgctggcgcatctggagattcgcgagcgccacccgacgctgcgggccatcgac
cggatcgaacaactgacgcccgagagcgttcctgctggctggccgtcccgggtttccgtg
ttcgcgctgtcgtcgatgccgccgctttccatggcgttgctcaaggcaatgtcccgcctg
atcgacgtgcacctttatgtcctcaatccctgcgagagctactggttcgacatcgtgcca
ccgtcgcggctgtcgtatctgacacaacgtgacggcaaagcgcaccgcgaggtggggcac
cccctgctggcggaatggggacggcagacgcagtcgcacatcgatgcgttgtacgcggac
cttgcgccgcaagcggtggaggaccacgcgctgtttcagccgaatcccgagcccacgctg
ctggccgcgttgcagaacggcattctttccctggacgatggtcgtcatggcgcacccgat
ggggtcgcggccgatggctcggtgcaggtgcatgtctgccatagccttgcgcgtcagatc
gaggtgctgcacgaccgcctgctggcgtgcttcgacgaaatccccgatctgcgtcccgac
gacgtgttgattaccgtgccggaccttggccgtgcggcgcctcttatcgatgccgtgttc
ggcacggcaacgccccgcattccttatctggtgaccggcctgccgccgacgcgcaccaac
ccagtcgcacgcgctttcgcgtcgattctggcattgccgcagcagcgggtggcagcgtcg
agtcttgtcgaactcgcacgcacggaagcggtagcagaacgttacgacctcggcggcaat
gtgctcgacgccattcagaactggctgcacagcgccggcgcacgccggggctggcgcgga
gatgccttgctgcggcttgagggcaccggccagacgtcacgcgatggcgcgatggccggc
gccggtgtggacgcacctcctgcgctggagcgccatacgctgggcgacgccatgatgcgc
ctgttcctcggctacgctttgccggacgacgccatgccggtcgacgactggctgcccgtc
ggcgggatcgaaggcggcagagccgagctgctgggacaactggcgcggctgatcgacgat
ctcgatatgacggcggtgtcgctccagaccgagcggaccggcctcgcgtggcgcgatcag
ttactggcaatgctggagcagttcttctcggatgagccgcgttttgccgacgacgtcgcc
gaagtgcgtatggccatcgaacagatcggtaccgccatcgccgacggtgcgcctgaggtg
catgtgccggtggaagtggtggcgcgcgtgttggccgacgcgctcgacgatccgacgcgc
ggcggggtaccgtcgggacgcgtgacgtttgccgcgattccgagcttgcgtctgttgccg
taccgcgtggtctgcatgatcggcatggacgatggcgtcttacccgggcgcgtgcgcgcc
gacgagttcgatctcatgcgggcgctcccacaacgtggcgaccgccagcgtcgcgatgac
gagcgcaatctgttcctcgatttgatgctgagcgcacaggaccgctttctcatcacctat
acggggcgaagcgttcgcgataatgcgccgttgccgccatccaccgccgtggacgaattg
ctggacttcacggggcagttgctcgcgccggtatcgcagggattcgacctcgacgagcag
cgcaaagcccgtgacacgcttgtcgtcctgcatccgcttcaaccgttctcacccgcgtac
ttcgacgggcgcgcgccgtcgctgtacagctatgacgttgccaacggcgaggccgctcag
caattggccggtcaattggcgtcccctgcgccggacgcagccgcaacgccattcgtccac
gcgccattgcccgccattgcgcagacgcatctgacgctcgacgacttgttacgcttttgg
cgccacccggggcgggcatgggcgcgcgaccggctgggcttgtcgctcggcgacgtgctt
accgaagtcgaagacgaagagccgttcgtactcgactggtcggggcgcgacgcgctcgcc
gcgcggctgctaccgcgtctgttgcgtgacgacgctcaggatgcccgggcacaggcggcg
gcgatcgagcgtattgcgaacgtcagtcacgagctgccaggaggggcgacgggtgcggta
tggcgtcgacgtgaactcggtggactgcgcgcactggccacgcgagtgagggaagcgcag
gcggagggcacacaggagttgctcgtgacgttgccgctcaagcccgcgctcccaccgtcg
tggacggcatcgacggatgcgatctggcacggcgatgcgacgctgtgcgcagattgcttg
ctgcaagggcgtctggccccggtgtcgcgccacggactcgtcatgcaccgctatggcagc
ttgcgtccgagcgatctgctcgccgcctggctcgcccacctcgcgctatgtgcccatttg
cagcagccggaacatgcggggcttgaagtcgcacctcgaacgctatggtacggagaggac
gagacatttgcgctgcgtcccgtggacgatgcggcggcgctgctcgcgcaatgggtggcg
ctgtttcgccttgggcagacgcggcctttgccgttttttgtgcgcagcgcctggaagctg
gcgagcaccgggaaaatgacggatgccgaaagcgcatggtccggctctgcgttcgcgcgc
ggcgatgccgacgatccctataccaagctgatctggcggggcgtggaagacccgctggcg
tcaccgttcgacttgctggcgaacacggtgttcggaccgatggtgcagcaccttgaactc
gtggagggcgcatga
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