Onion yellows phytoplasma OY-M: PAM_018
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Entry
PAM_018 CDS
T00154
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PAM_018 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
poy01007
]
PAM_018 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poy03016
]
PAM_018 (valS)
Enzymes [BR:
poy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
PAM_018 (valS)
Amino acid related enzymes [BR:
poy01007
]
Aminoacyl-tRNA synthetase
Class I (U)
PAM_018 (valS)
Transfer RNA biogenesis [BR:
poy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PAM_018 (valS)
Prokaryotic type
PAM_018 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
BAD04103
UniProt:
Q6YRJ6
LinkDB
All DBs
Position
21671..23713
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AA seq
680 aa
AA seq
DB search
MVDFPTNSNLSDASLVPSFLEIATTRPETMFADQALMVNPNDPRYQSFIGKKVFIPDTNI
QIPVISDNYVDINFGTGVVKVTPGHDINDFEVAKRHQLKALLCMNEDGTMNDLALQYQGL
DRFVCRQKLVQTLKQKGFFTKTENHLHKVGYSSISDAIIEPRLSLQWVLKTKAIAQIALK
TNKINFFPLRFENIFNNWLQNIEDWCISRQLWWGHQIPAWHKGQEIKVQIESPGPEWSLD
CDVLDTWFSSALWPFSTLGWPNCNAPLFQNRFPTDVLVTGYDILTFWVSKMVFQSILLTH
KDPFKDVLLHGLVRDNKGQKMSKSKGNGVDPLEVVAKYGTDALRWFLTTNAAPGFDLFYD
ETKVASSWNFINKLWNISRFVKLNTSTLDTDFDINLLTLTQKALLTQLHLTTQKVTTLYQ
KYELKEIGKILYHFVWEDFANWHLEFAKHDLDQNNSNLTNLHNSQKFLVYMMKHILQLLH
PFIPFVTDALYENFDNKTNITQTTLQKTSYCNLDALADFENLKNLIIKTRHLRQESNINC
KLNLELEVASQFSTILQDFVNLQQALEKFFKTLQIKITNKVTNSKKTIWLIEKNLSLYID
RKTLNELNETKFESNFLQQKNTLLKEIKRSETILNNPSFLQKAASAKIEIEKKKYESYCK
QYKKLLESKNNSNPLNPNKK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttggttgattttccaactaattccaatttgtctgacgcttctttggttccttctttttta
gaaattgcaaccactcgccccgaaaccatgtttgccgatcaagctttaatggtaaatcct
aacgaccctagatatcaatcttttattggcaaaaaagtttttattcctgatactaacatc
caaattcctgttattagtgataattacgtagatattaattttggtacaggagttgtaaaa
gtgacacctggacatgatattaatgattttgaagtagctaaaagacatcaattaaaagct
ttattatgcatgaacgaagatggcactatgaacgacttagccttgcaatatcaaggatta
gaccgctttgtttgtcgtcaaaagttagtgcaaactcttaaacaaaaaggattttttaca
aaaaccgaaaatcaccttcataaagtaggatattcaagtatttcggatgccatcatcgaa
ccgcgtctttctttacaatgggttttaaaaaccaaagccatcgcccaaattgctttaaaa
acgaacaaaatcaatttttttccgcttcgttttgaaaatatttttaataattggctgcaa
aatatcgaagactggtgtatttcgcgtcaattatggtggggtcatcaaattcctgcttgg
cataaaggacaagaaattaaagttcaaatagaaagtcctggtccagaatggagccttgat
tgtgatgttttggatacttggttttcttctgctttgtggccttttagcactttgggatgg
cctaattgcaatgcccctttatttcaaaatcgttttcctactgatgttttagtaacaggc
tatgacattttaactttttgggtatcaaaaatggtttttcaaagtattttattaacccac
aaagacccttttaaagatgttttattacatggtttagtaagagataacaaaggacaaaaa
atgtctaaatcaaaaggtaatggtgttgatcctttggaagttgttgccaaatatggtacc
gatgctcttagatggtttttaactactaacgctgctcctgggtttgatttattctatgat
gagactaaagttgcttcatcttggaattttattaataaattgtggaatattagtcgtttt
gtaaaattaaataccagcaccttagacactgattttgatatcaatcttttgactttgacc
caaaaagcccttttaacacaattgcatttaacaactcaaaaagtaacaactttatatcaa
aaatatgaattaaaagaaattggaaaaattttatatcactttgtttgggaagattttgct
aattggcatttagaatttgccaaacatgatttagatcagaataactccaatttaacaaac
ttgcacaacagtcaaaaatttttagtttatatgatgaaacatattttgcaactcttacat
ccttttattccttttgtaactgatgctctttatgaaaattttgacaataaaacgaacatt
actcaaaccactttgcaaaaaacttcttattgtaatttagatgccttagctgattttgaa
aatcttaaaaacttaattattaaaacacgtcatttaagacaagaatccaatatcaattgt
aaattaaatttagaattagaagttgcatctcaattttcaactatcctccaagatttcgta
aatttgcaacaagctttagaaaaatttttcaaaactttacaaattaaaattactaacaaa
gttaccaattcaaaaaaaactatttggttaattgaaaaaaatttaagtctttatattgac
cgcaaaaccctaaacgaacttaatgaaaccaaatttgaaagtaattttttacaacaaaaa
aatacccttcttaaagaaattaaaagaagtgaaaccattttaaataatccatctttcttg
caaaaagccgcaagtgccaaaattgaaattgaaaaaaagaaatatgaaagttattgtaag
caatataaaaaattgttagaaagtaaaaacaattctaatccgctaaatcccaacaaaaaa
taa
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