Onion yellows phytoplasma OY-M: PAM_025
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Entry
PAM_025 CDS
T00154
Symbol
dppD
Name
(GenBank) ABC-type dipeptide/oligopeptide transport system, ATPase component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy02010
ABC transporters
poy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PAM_025 (dppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAM_025 (dppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PAM_025 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
poy02000
]
PAM_025 (dppD)
Transporters [BR:
poy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
PAM_025 (dppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
Mg_chelatase
TniB
tRNA_lig_kinase
SLFN-g3_helicase
DUF1668
AAA_16
AAA_29
NPHP3_N
PFK
DUF5906
Motif
Other DBs
NCBI-ProteinID:
BAD04110
UniProt:
Q6YRI9
LinkDB
All DBs
Position
32258..33295
Genome browser
AA seq
345 aa
AA seq
DB search
MKKEILKICDLNLNFRVKKHLIYALRGINLSLGEGEILGLVGESGSGKSVISKALMGLLP
DNALIQKGSILYKDLDLAQMKDKQFNKIRGNKISIIFQNPLSSLNPLIKVGKQIYESLQL
KKTKSTHQQRKNQVLKLMEEVGIPEPMKRFNQYPHQLSGGMCQRIVIAIALANEAKILIC
DESTTALDVSVQKKILDLIKKLQKEKKLSIIFITHDLEVVKYVADRIAVIYAGRIVEYGT
THEVFYNSKHPYTWALLQSMPVFAKKGNKLKSIQGNPHLLTAPILGDAFAPRNPYALKID
FEKEPPMFKISATHYASSWLLHKFAPRIEVPDLILELQKKGGCCN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagaaatacttaaaatatgtgatctaaatcttaattttcgtgttaaaaaacat
ttaatctatgcactaagagggattaatttgtctcttggtgaaggcgaaattttggggtta
gtaggagaatcggggagtggtaaaagtgttatttctaaagctttaatgggacttttacct
gataatgctttaatacaaaaaggttctatcctttataaagacctagatttagcccaaatg
aaagacaaacaatttaataaaattagaggaaataagatttctattatttttcaaaatcct
ctttcaagtcttaatcctttaattaaagttggtaaacaaatctatgaaagcctacaatta
aaaaagactaaaagcactcatcaacaacgcaaaaatcaagtattaaaattgatggaagaa
gtaggaattcccgaacctatgaagcgtttcaatcaatatcctcatcaactttcaggtggg
atgtgtcaaagaattgtaattgctattgctctagctaatgaagccaaaattttaatttgt
gatgaatctactacagctttggatgtaagtgtgcaaaaaaagattttggatttgattaaa
aaattacaaaaagaaaaaaagctttccattatttttattactcatgatttagaagtagtt
aaatatgtagctgatagaatagctgttatttatgctggtaggattgttgaatatgggact
actcatgaagttttttataatagtaaacatccctatacttgggctttgttgcaatctatg
cctgtttttgccaagaaaggcaacaagttaaaaagtattcaaggaaatcctcatctgctt
actgctcctattttgggggatgcttttgctcctcgtaatccttatgctttaaaaattgat
tttgaaaaagaacctcccatgtttaaaatctctgctactcattatgcaagtagttggtta
ttacacaagtttgctccccgaattgaagtccctgatttaattttggagttgcaaaagaaa
ggaggatgttgtaattaa
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