Onion yellows phytoplasma OY-M: PAM_051
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Entry
PAM_051 CDS
T00154
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy03420
Nucleotide excision repair
poy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PAM_051
03430 Mismatch repair
PAM_051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poy03400
]
PAM_051
Enzymes [BR:
poy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAM_051
DNA repair and recombination proteins [BR:
poy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PAM_051
MMR (mismatch excision repair)
Other MMR factors
PAM_051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_22
Viral_helicase1
GvpD_P-loop
AAA_30
AAA_16
AAA_11
SLFN-g3_helicase
ResIII
cobW
NB-ARC
ATPase
ADDB_N
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAD04136
UniProt:
Q6YRG4
LinkDB
All DBs
Position
62166..63443
Genome browser
AA seq
425 aa
AA seq
DB search
MLFNLSKEQKDIINSDASCMYIHGGAGSGKTTILIEKLRQKEKEKPLILVATNATKNIIY
DKLFSSLKEDCPSYNDDELEKYLKDNYEIRTFHSFAYSCYLKYNIFNETAKQRKFIDDET
KLNILKLILKENQDLKLYFKEQIKYSFRKLLQELNNLIRLTFQKENCYSSIKIDDKVLKK
SFELLLNLYYEKLNYYNLITFDGLLIETSDFIEFVERNNGLIYNRPVFIDEFQDLNYFYY
FIIKELLFNKPNSLYCFGDYTQNIYSFFGSSERILELFVKDFKPEKHFLNVNYRSKGINI
VKAANELIDNKEYLQLSFGEKKYRDFINFSFFDNFYQQINYLCEKIKNSLIYSTTVLCRS
NGELQKLKDEFEKNQIPFTISDNNSKENEIVLSTIHGYKGYENECVYLIGWQNRNESQDK
VLEKK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaatttatcaaaagaacaaaaagatattattaattcagatgcttcttgcatg
tatatacatggtggagctggttctggcaaaactaccattttaattgaaaaattaagacaa
aaagaaaaagaaaaacctttaattttggtagctactaatgctactaaaaatattatttat
gataaattattttcatcattaaaagaagattgtccttcttataatgatgatgaattagaa
aaatatttaaaagataattatgaaattagaacatttcatagttttgcttattcttgttat
ttaaaatataatatttttaatgaaacagcaaaacaacgaaaatttattgatgatgaaact
aaattaaatattttaaaactgattttaaaagaaaatcaagatttaaaattgtattttaaa
gaacaaataaaatattcatttagaaagcttttacaggaattaaataatttaatacgttta
acttttcaaaaagaaaactgttattcatctattaaaattgatgataaagttttaaaaaaa
tcttttgaattgttattaaatttgtattatgaaaaattaaattattataatttaataact
tttgatggtttattaattgaaactagtgattttattgaatttgttgaaagaaataatggt
ttaatttataatcgtcctgtttttattgatgaatttcaagatttaaattatttttattat
tttattataaaagaacttttatttaataaaccaaattctttatattgttttggtgattat
actcaaaatatttatagtttttttggttctagtgaacgtattttggaactttttgtaaaa
gattttaaacctgaaaaacattttttaaatgttaattatcgttctaaaggtattaatatt
gttaaagcagctaatgaattaattgataataaggaatatttacaattatcttttggtgaa
aaaaaatatagagattttataaatttttctttttttgataatttttatcaacaaattaat
tatttgtgtgaaaaaattaaaaattctttaatttattctacaactgttctttgccgtagt
aatggtgaattacaaaaacttaaagatgagtttgaaaaaaaccaaattccttttactata
tctgataataatagtaaagaaaatgaaattgttttgtcaacgatacatggatataaagga
tatgaaaatgaatgcgtttatttaattggttggcaaaatcgaaatgaatcacaagataaa
gttttagaaaaaaaataa
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