Onion yellows phytoplasma OY-M: PAM_125
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Entry
PAM_125 CDS
T00154
Symbol
trmU
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
PAM_125 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
poy03016
]
PAM_125 (trmU)
Enzymes [BR:
poy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
PAM_125 (trmU)
Transfer RNA biogenesis [BR:
poy03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
PAM_125 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
ThiI
Motif
Other DBs
NCBI-ProteinID:
BAD04210
UniProt:
Q6YR90
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All DBs
Position
147401..148537
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AA seq
378 aa
AA seq
DB search
MTKVVVGLSGGVDSAVAAFLLKKQGYLVEAVFMRNWDSNLNFDIQGNPTLNDICSQELDY
KDSLKVSEQLGIKLHRVDFIEEYWQKVFMSFIKAFENNLTPNPDILCNNEIKFRAFIEYA
TTKLAPQYIAMGHYANIIYETSSDQKLVPRLACAVDQNKDQTYFLSQLTTKQLQNILFPL
GNLTKQEVRQIALENNLINATKKDSTGICFIGERNFFQFLSNYLPAQKGDIKTLDGTFLA
HHKGVMYYTIGQRKNLGLGDVPSQKPWFVVGKHLPTNTLYVEQGSTHPYLYSDKALIGDI
VWRGKKTNLHLQAKMRYRQPNQDVILTWLDQNNLEIHYPQTIKAVTPGQICAFYDKNICC
GAGVIKEVYFQGTKRLYT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagttgttgttggtttatcaggcggagttgatagtgccgttgctgcttttctt
ttaaaaaaacaaggttatttggtagaagcagtttttatgcgtaattgggatagcaatctt
aattttgatatccaaggtaatcccactttaaatgacatatgctcgcaagaactagattat
aaagattccttaaaagtgtctgaacaactaggaattaagttgcatcgtgttgattttatt
gaagaatattggcaaaaagtctttatgtcttttatcaaagcctttgaaaataatcttact
ccgaatcctgatattttgtgtaataatgaaattaaatttagagcttttattgagtatgca
acaacaaaacttgcccctcaatatattgctatgggacattatgctaacattatatatgaa
acttcttcagaccaaaaattagttccacgacttgcttgtgctgttgaccaaaacaaagat
caaacttattttttatcacaactaacaactaaacaattacaaaatattttgtttcctttg
ggcaatctcacaaaacaagaagtacgccaaattgctttagaaaataatttaattaatgcc
actaaaaaagattccacagggatttgttttattggtgaaagaaatttttttcaattttta
agcaactatttacccgctcaaaaaggtgatattaaaactttggatgggacttttttagca
catcataaaggagtaatgtattataccatagggcaacgtaaaaatttaggtttgggtgat
gttcccagccaaaaaccttggtttgtcgttggcaaacaccttccaactaacactttatac
gtagaacaaggtagcacacatccttatttatacagcgacaaagccttaattggtgatatt
gtttggcgcggcaaaaaaaccaatttgcacctacaagccaaaatgcgctaccgccaaccc
aatcaagacgttattttaacttggctagaccaaaacaacttagaaattcattatcctcaa
acaattaaagcagtaactccagggcaaatatgtgctttttatgataaaaatatttgttgt
ggtgcaggcgttattaaagaagtttattttcaaggcacaaaaagactatacacttaa
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