Onion yellows phytoplasma OY-M: PAM_154
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Entry
PAM_154 CDS
T00154
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
poy
Onion yellows phytoplasma OY-M
Pathway
poy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
poy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PAM_154 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poy03400
]
PAM_154 (priA)
Enzymes [BR:
poy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAM_154 (priA)
DNA repair and recombination proteins [BR:
poy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAM_154 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
PriA_C
CbiA
SLFN-g3_helicase
AAA_19
AAA_22
AAA_30
PIF1
ATPase_2
nSTAND3
AAA_7
PhoH
ABC_tran
CDH23_a-b
Motif
Other DBs
NCBI-ProteinID:
BAD04239
UniProt:
Q6YR62
LinkDB
All DBs
Position
complement(181476..183935)
Genome browser
AA seq
819 aa
AA seq
DB search
MIAEIIIDIKTTYQGINKPFDYLVPPHFEKIIKKAMRVVVPFGNANSQRLGYIINLKENS
KFNKNLKEIITILDETPYFDQEFFLLSQEMLKTPFIIKALVYETIFPKEFVKSFLKEIKI
INKELFPENLKGFFANKKELFLNPKNKSQEKLLEHFTKLSKKKIVIIKDILQLKEKNTEK
KICIYHLNPQLSEQKDIKLTPKQKDFIAKLKELKQLKPLKPLKMLDKTSSNEIKHSKPKI
KTQEITRKKALELTSNSIIQSLIRKKILLQTEQKISIVLNHNFDLLAEDKKIILNEEQQQ
IAQKINLNYHKTYLLYGKTGSGKTEIYLHLITKVLNQNKQVLLLVPEVMLIAPLMQRLQA
KFTNKNIAILHSYLSPKEHLDQFLKIKEQQACIVLGTRSAIFAPLNNLGIVIIDEEHDEA
LIEKERATYDARTLAQIRAKYHKIPLILGSATPSLESHYQVLQQNYQLLSLTKRALIDAL
PTIELVDMKEELKKGNLEPFSQTLKHALREVLAKQQQAILFINTKGFAPFVLCRFCGFVP
KCHKCNNSLTFYQKQELLKCSHCNYKEQFTPKCMRCSKEQIKEVGVGIEYIEAYLQKEFL
QARLIKFDSDTITKISQYEKLWNDFNQEKADILLGTQMIAKGLDFHKVTLVGILMADSLL
KIPSFKGSEKTFQLLIQAAGRCGRKEQGKVIVQSYNIDHFAINAAVKYEEKEFLRQLLEE
RKISQNPPFGYLSQILISHKDFKKTFDIAYRIKAVLANRFSHKITVLGPVLSLIPKKNNR
YRCLLTLKYSIWPLDLDFILENNIHQDALIIFDRFANLL
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
ttgatagctgaaataattatagatataaaaactacatatcaaggaattaacaaacctttt
gattatttggtaccaccccattttgaaaagataatcaaaaaagcaatgagagttgtagtt
ccttttggtaatgctaattcgcaacgcttaggctatattatcaatttaaaagaaaatagc
aagttcaataagaacttaaaagaaataataactattttagatgaaactccttattttgat
caagaattttttttattatcccaagaaatgttaaaaactcctttcattattaaagcctta
gtttatgaaactattttccccaaagaatttgtaaaatcttttttaaaagaaattaaaatt
ataaataaggagttatttcctgaaaatctcaaaggttttttcgcaaacaaaaaggaactt
tttttaaatcccaaaaacaaatcgcaagaaaaactattagaacattttacaaaactatct
aagaaaaaaattgtcataatcaaagatattttacaactcaaagaaaaaaacactgaaaaa
aaaatatgcatttaccaccttaatccgcaattaagtgaacaaaaagatataaaattaaca
cccaagcaaaaagactttattgcaaaattaaaagaattaaaacaattaaaacctttaaaa
cctttaaaaatgttagataaaacaagctcaaatgaaatcaaacatagcaaaccaaaaata
aaaactcaagaaatcacaagaaaaaaagccttagaattgacttcaaacagcattattcaa
tccttaatccgcaaaaagattcttttacaaacagaacaaaaaataagtatagttctaaat
cacaactttgatttacttgcagaagacaaaaaaataattttgaatgaagaacaacaacaa
atagcacaaaaaataaatcttaattaccacaaaacttatcttttatacggaaaaacaggc
tcaggcaaaactgaaatttatctccatttaattaccaaagttctcaatcaaaataaacaa
gttttattattggtacctgaagtaatgttaatagctcctttaatgcaacgcctccaagcc
aaattcacaaacaaaaatatagctattttacacagttatttaagccccaaagaacattta
gaccaatttttaaaaatcaaagaacaacaagcctgcattgttttaggcactcgtagtgct
atttttgctcctttaaataatttaggaattgtcatcattgacgaagaacacgacgaggct
ttaatagaaaaagagcgcgccacttatgatgcaagaaccttggcacaaataagggctaaa
taccacaaaattcctttaattttaggaagcgctactccttctttggaaagtcattatcaa
gttttacaacaaaattatcaacttttaagccttaccaaaagagctttaattgatgcttta
cctaccatcgaacttgtagacatgaaagaagaattaaaaaaaggcaatttagaacctttt
tcccaaaccctcaaacatgcattaagggaagttctagccaaacaacaacaagccatttta
tttatcaacactaaaggttttgcaccatttgttttatgtcgtttttgcggctttgtcccc
aaatgccataaatgcaacaatagccttactttttatcaaaaacaagaactattaaaatgt
agtcattgcaactataaagagcaatttacaccaaaatgcatgcgctgctccaaagaacaa
ataaaagaagtaggcgttggtatcgaatacatcgaagcttatctccaaaaagaatttttg
caagcaagacttatcaaatttgattcagatactatcacaaaaattagtcaatacgaaaaa
ttatggaacgattttaatcaagaaaaagcagatattttgttaggaactcaaatgattgcc
aaaggacttgactttcacaaagttactttagtaggtattttaatggcagattctttactc
aaaattcctagttttaaaggctcagaaaaaacctttcaattactcattcaagcagcagga
cgttgtggcagaaaagaacaaggcaaagtaattgtgcaaagctataatatagaccatttt
gcaattaatgcggcagtcaaatatgaagaaaaggagtttttgagacaacttttagaagaa
agaaaaatatcacaaaaccctccgtttggatacctgagccaaattttaatctctcataaa
gattttaaaaaaacttttgatattgcttaccgcatcaaagcagtattggccaatcgcttt
tcacacaaaataactgttttaggtcctgttttatcacttattcctaaaaaaaataaccgt
tatcgctgtttattgacactaaaatatagcatttggcctttggatctagattttattttg
gaaaacaacattcaccaagatgctttaattatttttgataggtttgctaatttattgtaa
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